Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45017 |
Symbol | |
ID | 7199682 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 1009622 |
End bp | 1012281 |
Gene Length | 2660 bp |
Protein Length | 811 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178894 |
Protein GI | 219116198 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0053865 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCCGATACGG CACGGTATGC CCCATTGAAA GCGTTCCGAG TGTGTGCGAA CCCCCCTTTC TTCCTTCCCC AGCCCCTCAT TGTTGCTTAC TATAAGCTTC CTTGCATCCG GTACTGGTGC CATTGATTCA CATGTTTCGT TCGTCGACAG TCCTTCTCGC AACTCGGTCG TCGGCGTTGG CGCGGCATTC CGCGACAGCG GTCGCTCCGA CTCGGCGGCG GTGCGCCTTT GTTCTGGGAC ATTCGGATCC CCCGACGCGT CTCGCGGGAC AGCCGCGTTT CTTGTCTTCG ATTGATTCAC CTTTACCACC GACCAGTAAT CACCGGCACC AACCGTTGGA ACATGCACGG GGATCCATTC TTTACACGGA AACGGACGAA GCCCCCGCCC TCGCAACCTT TTCGCTCTAC CCAGTCATAT CAAAGGTACC GTAACGGCAT TGCCGATCCA GTCCTTCTCC ACGCCTTGCT TCCAGATCTC TCACTCTCTT TGATTTCGCT CCGTTCTGGT CCAGTTCTCT GCTCTCGCTA ATGTGGATAT CGTGCCTTGC GATATTTCCG TGGCGGGCCG CGTCTTGGCG GCGTTTCCGG AATGCCTCAA GCCATCGCAG CGGGTCCCCG ACAATCTCTC CTACCTTGGC AAAAAGGCTC TCGAAGCAGA CTGCGCTATC GTCAAATTGC CCAACATTTC TGCACCTCTC AACCAACTGC TGGAATGCGT TAACGAACTC CGCCACAAGG GATACGACGT TCCCCTCTAT CCGCACGAAC CAAGCAACGT CGAAGAAACG GACGTGAAAC ACCGTTACGA TAAACTCATG GGTTCCGCGG TCAATCCCGT ATTACGGGAG GGGAATTCTG ATCGTCGCGT TGCGGCACCC GTCAAGGCCT ACGCCCAAAA GAACCCGCAC CGCATGGGCT TGTGGAGCAA GGCATCCCGC ACCCACGTGG CACACATGGA AACGGGAGAC TTTTACGAAA CGGAACAGTC CGCCGTCATG GCGCTCCCTA CCTCAGTCTC CATTGTGCTG GCTACCAAGA ACGAAGGCGA AATCGTCCTC AAGGCGGAAA CGCCACTCGA AGAGGGGGAA GTCGTTGATG CGTCGCGAAT GAGCGTCAAG TCCTTGCGAG ACTTTTACGA ACGTGAAATG CAGGACGCTA AGGACTCCGA ACTCATGCTC TCTCTACATC TCAAGGCCAC CATGATGAAA GTCTCGGATC CAATCATGTT CGGACACGCA ATTCGTGTCT TTTTCCAAGA CGCCTTTGAC AAGCACGGGG AGGTCTTGGC TTCGATTGGG GCCAATCCCA ACGGAGGTCT CGGTAGCGTC TACGAAACAA TCAAATCCAA ACTGCCCGCG GATCAGGCTG CTACTATTCA AGCCGACTTT GAAGCCTGTT TTGAGGATCG CCCCTGGCTA GCAATGGTTG ATTCCGATAA GGGTATTACC AACCTACACG CACCCAACGA TATTATCATT GATGCCAGTA TGCCTGTCGT GGTACGTGAT TCGGGTAAAA TGTGGAACAA ATTGGGCGAG TTGGAAGACG TCAAGTGCCT CATTCCGGAT CGATGCTACG CCACCATGTA TCAAGAAGTG CTTTCCTACG TCAAGACCAA GGGACAGTTT GATGTGGCCA CCATGGGATC GGTTGCCAAC GTGGGGCTCA TGGCCAAAAA AGCGGAAGAG TATGGATCGC ACGACAAAAC ATTCGAAATC CCGAGTGATG GTCGCGTTGT GGTGAAAGAT AATAACACAG GCGAAGTGTA CTTTGAACAT GTGGTGAATG CCGGCGATGT GTGGCGTATG TGCCAAACGA AGGACGTGGC CATTCGCGAC TGGGTCCGTC TCGCTGTGGA ACGTGCCCGC GCCACCGGCG ATCGTACCAT CTTTTGGCTC GACAAGCGTC GTGCCCACGA TGCCTCGCTT ATAAAAAAAG TCAATACTTA TTTGAAAGAT CACGATACGG ATGGTTTGGA TATTTCCATT ATGCGTCCGG TAGATGCCGT GCGTATTTCT ATGGAACGAG CTACGGACGG CAAGAATACT ATTTCAGTTA CTGGAAATGT GCTGCGTGAT TATTTGACGG ATTTGTTTCC TATTCTAGAA CTCGGGACGT CCGCTAAGAT GCTTTCCATT GTTCCTCTTT TGGCGGGTGG CGGCTTGTAC GAGACGGGAG CCGGTGGTTC GGCCCCCAAG CACGTGCAGC AATTTGTGAA GGAAGGCCAT TTACGGTGGG ATAGTCTCGG AGAATACTTG GCTTTGGCGG TTGCGTTGGA GGGGTTAGCC GACACCGCGG GCAACCCGAA AGCCAAGATT CTTGGTGACT GCCTTAACAA GGCTGTGGGC CGGATTTTGA CGAATCGGAA GAGTCCATCC CGTGTGGTGA ACCAAATCGA CAACCGTGCA ACCAACTTTT ACGTGAGCTT GTACTGGGCC GACTTTTTGC AACAGGAAGA TCCATCGTAC AAGGCGATTT TTGAATCACT TACGGAGAAT CGCGGTAAGA TTGTTGAAGA GTTCTCGCAA TGCCAGGGGA CCGCCGTGGA TCTAGGTGGA TATTATTTGT TCGACCCGGC CAAGACCAAG GCCGCCATGA ACCCCTCGCC CACACTCAAC AAGATCCTGA GTAGCTTTGG TCCCGACATG AACTAAAGAT
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Protein sequence | MFRSSTVLLA TRSSALARHS ATAVAPTRRR CAFVLGHSDP PTRLAGQPRF LSSIDSPLPP TSNHRHQPLE HARGSILYTE TDEAPALATF SLYPVISKFS ALANVDIVPC DISVAGRVLA AFPECLKPSQ RVPDNLSYLG KKALEADCAI VKLPNISAPL NQLLECVNEL RHKGYDVPLY PHEPSNVEET DVKHRYDKLM GSAVNPVLRE GNSDRRVAAP VKAYAQKNPH RMGLWSKASR THVAHMETGD FYETEQSAVM ALPTSVSIVL ATKNEGEIVL KAETPLEEGE VVDASRMSVK SLRDFYEREM QDAKDSELML SLHLKATMMK VSDPIMFGHA IRVFFQDAFD KHGEVLASIG ANPNGGLGSV YETIKSKLPA DQAATIQADF EACFEDRPWL AMVDSDKGIT NLHAPNDIII DASMPVVVRD SGKMWNKLGE LEDVKCLIPD RCYATMYQEV LSYVKTKGQF DVATMGSVAN VGLMAKKAEE YGSHDKTFEI PSDGRVVVKD NNTGEVYFEH VVNAGDVWRM CQTKDVAIRD WVRLAVERAR ATGDRTIFWL DKRRAHDASL IKKVNTYLKD HDTDGLDISI MRPVDAVRIS MERATDGKNT ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLLAGGGLY ETGAGGSAPK HVQQFVKEGH LRWDSLGEYL ALAVALEGLA DTAGNPKAKI LGDCLNKAVG RILTNRKSPS RVVNQIDNRA TNFYVSLYWA DFLQQEDPSY KAIFESLTEN RGKIVEEFSQ CQGTAVDLGG YYLFDPAKTK AAMNPSPTLN KILSSFGPDM N
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