Gene PHATRDRAFT_44907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44907 
Symbol 
ID7199821 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp608049 
End bp609267 
Gene Length1219 bp 
Protein Length355 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178811 
Protein GI219116032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTTAGATAC AATCTGGCCG CGAGTCTCTC GGGAAGACGT TTATAGCGAG TGCATCCATT 
TGTAAGGGGC GAAGTGCAGC GCCATCTGCA AAATGGCGTT AGAATACGAA TGGTGGGAGT
ACTTTTTGAT TCCGTGGATT GCGGGGGCAG TTGGTTACCT AACTAACGTC CTTGCGCTGC
AAATGACTTT TTATCCGATA GAGTTTTTCG GCATCGAATT ATTCCGACTC AAAGATGAAC
CGTGGGGCTT GTTTGGCTGG CAAGGCATCA TTCCTACCAA GGCCGAAAAA ATGGCGTCAA
TCAGTTTCGA ACTCATGACA ACTCGGCTAT TCAATATCAA AGATATCTTT CATCGCCTGG
ACCCACGACG ATTCAGCGAA ATCATGGAAG ACTCGGTACT GCTAATGATG GATTCTATTA
TTCAGGAGGT TGCGAACGAA TACATGCCGT CGGTGTGGAA ATCGTTACCG AAGGAAGTCA
AGGATGATGT CGTGCTGACA GCCGATCAAG AATGCGGGGT ATTTTTGACC GAGTTTATGC
AAGATATGCA GGACCATGTC GACGACGTGG TGGACATCAA GCATATGACG GTTACAGCCT
GCGTCGCGAA CAAACATTTG ATCGTCAAGA TCTTTCAAGA ATGCGGCGAA CAAGAGTTCA
TATTCATCCG AAAGAGTGGG TTCTACTTTG GTTTCCTATT TGGTTGCATT CAAATGGGCG
TTTGGTTTTT CTATTCGGCC GCATGGGTAC TACCTGCTGC GGGTTTTTTG GTCGGCTGGG
TAACAAACTA CCTTGCGCTG AAAGTCATCT TTTCACCACT CGAACCGCGC AAGATTTTTG
GGTTCGAAAT CCAAGGCATT TTCCTTAAGC GGCAGCACGA AGTTTCTGCC ACGTTTGCCC
GCGTGGTAAT TACCGAAATC CTTCACGTCA AGGCCATCTG GGAAGCGATC TTCACTGGGC
CCTTGTCGGC AAACTTTTTT GCCATGCTCC GGGCGCATAC ACTCGTGTTG ACGGACAAGC
TCGTTGCGGA AATCAAACCC CTTGCCGTCG CTGCCATGGG CGCCGACCAG TTCGCCCGCA
TGAAAGAGGA CATCGCCCAA AAGGTAATCG ACAACTTACC CAACATCATT GATCAAAGTT
ACGAATATAC ACAAGAAGCA ATGGACATGG AGACAACAAT TCGAACGAAA ATGCAGGAAC
TACCTCCAGC CGAATTTGA
 
Protein sequence
MALEYEWWEY FLIPWIAGAV GYLTNVLALQ MTFYPIEFFG IELFRLKDEP WGLFGWQGII 
PTKAEKMASI SFELMTTRLF NIKDIFHRLD PRRFSEIMED SVLLMMDSII QEVANEYMPS
VWKSLPKEVK DDVVLTADQE CGVFLTEFMQ DMQDHVDDVV DIKHMTVTAC VANKHLIVKI
FQECGEQEFI FIRKSGFYFG FLFGCIQMGV WFFYSAAWVL PAAGFLVGWV TNYLALKVIF
SPLEPRKIFG FEIQGIFLKR QHEVSATFAR VVITEILHVK AIWEAIFTGP LSANFFAMLR
AHTLVLTDKL VAEIKPLAVA AMGADQFARM KEDIAQKVID NLPNIIDQRT TSSRI