Gene PHATRDRAFT_44894 details

Gene Information

• Locus tag: PHATRDRAFT_44894
• ID: 7199813
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 568160
• End bp: 573204
• Gene Length: 5045 bp
• Protein Length: 1032 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002178806
• Protein GI: 219116022

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00992786
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTTGGTCAT CGATCCATCT CGTACTCTGT GTAGAGACGT TGTGTAGTGT CGCACGAGTG 
CGTTCCGCTC TATACCCGAT CGACGCAGAG AACCTATTTC CCGTACCACG AGATATCCGG 
GACGTGTCCA TCCGTCGTGT TCTTGGCTCC ATCAGTCGAC CGTTTGCGCC AACGATTGGC 
ATCGTCTACT CTGCACAGTC CGCTTTATCG CAACAGCCGT ATTGACCGTG AGCCTCCATT 
TTCTCGGATT GGAAGGTCGG ACGCTTTGCT TTTTTATATT TATTCATCTG TTTGCATACC 
GACGTGTTGT GTACATACTC GACCGTGTTT TCGTTTTTGT TGGTGAAAGC CACGGCATTC 
TTTCTTCTAG TTTTCCCTCG TTCGTGCCTG TACGCGTATT TAAAAAAGCA ATGAAGGCAA 
TACACGTCGG TGTGCCACGC TACTGCCGCG CACTGTCGTT CGATAACGAC ACATCCACCG 
TCTCATCGCA CAACAACAAT AGTCACAGAA TACCGATATC GACAACCACC ACCACCACCG 
TCCGCACAAC AACAACATCA ACTCGCCTGT TGCGCAAAAT CACTGTCCGA TCGGTAATCG 
TCGCTTTCTC TTGTGCGGCA CTGTGGTTGC AACTCGACCC GCCGCTGTTT GTGGCTGCCT 
TTGCCCCCGG GACGTGTACT ACGGTGACGA CTACTGCCAC CGTCGCACGC GTATTGCCGT 
ACGCGCTGCG GACCGTGACG ACGAAACCGT ATCGACTGGC GCACTCGCAA CCCGTACCGC 
TACATCCCCA CCACCGTATC GACGGCGTAC CGTTGGCCGC CACTGCACGC GAAACGGGAT 
CCACCGCCAA GGACGACGAC ACGGCCGAAT GGAGGGCCGT ACTGGCCGCG TTGACCCTCT 
ACCAAGCCGC CTTTGGTGAC GTCAAGGTGC CGCAAAAATT TATTGTACCC ACCGCCTCGC 
CTTGGCCCAA ACCCGCCTGG GGGCTCAAAC TCGGCAAGGT GGTCGCCAAC ATTCGACTCA 
CCGGAAAGTA TATACACGGA CGGGACAAGC GCAAACAAGC GCTCGAAAAA TTAGGTTTTC 
TATGGGCGGC ACGGAGTACG CCGCAAACGC GGGCCGAGGC GGAAGACGAC CGCTCCAACG 
TGACGGTGGA ACAAATTTTG GCAGCCTTGG TAGCCTACCG TGAGAACGTG GCTCCGTTGG 
GACCCGTGCC CGCCAAGTAC ATCGTGCCGG ATGCCGAGCC TTGGCCAGAA CGGGTACGGG 
GGCTCCCTTT AGGATCGCAA CTAGCGCGAT TGCCAATGGA CCAATTGCCG GAAACAATCC 
AGGCCAAGCT GCAAGACTTG GGCGTCATGG AACGATATAT GCCGTTGGCA TCCTCCGGCT 
CAATGGGTGC TCCCCCGACT GCGCCGGTTG TCTCGGGAGA AGCGTACCAG TCCGCAAGTA 
ATGTACCACC AACTGCTAAC GACATTCGCT TCCATAAGGT CTACCTCGCC TTGCGAACAT 
ACAAGGATGT GTACGGAGAT TTACTTGTTC CGCAACCATT TGCGGTTCCA TCCAAAGCCC 
CATGGCCGCA AGAAACCTGG GGACTCCGCT TAGGCGCCCG GGTGAACGCG GTACGATCCC 
AGGGAACCTT TGTTAATGCG AATCCCGATC GGCGTCAGGC ACTGGATGAT TTGGGTTTTG 
TGTGGTCCCC GCCCAAGGAA GGCTCGCGGC GCGTCAAAAG CCGCGAAGCG AACAGCTTAC 
CCGATACTGC CATTCCTGCC AGCGCAACGA CGAAGAATTC GTTGGACTCC TTGCTCGACG 
ATTCGACCTT TGATTTTGGA CAGGACTTTA TGGATCAAGG AGGTGACGGC CGTGACGGCT 
TGGGGGGAGG ATCCGCGACA GCTCCAACCT GGGGTTTAGA GGGTGGCCGC TTGCTGCCTG 
TCGAAGAAGC CGCGGCGGCG GCTCAGGCAG CGGCTGAAGA AGAGTACGCT CCCCCACGGA 
CACTTCAGGA AAGTCTAGAC GAGGCGACCG TTCGAGCGAT GGAATGCGGC GTCATCGAAG 
GGTTGACGGA CCGAAAACGC GTCATGAAAG GCAAACGCGA AAAGGCGATT CCCTGGTTTA 
ATGACGATTT TGGAGACGAC TTTGTCTTTG AAGATGTCGT TGAGGCCTTG TCGTTGTACA 
AGCGTATGTA TACGGATTTT GACAACTTGA CTGCGAGCGA AGAATTTGTC GTTCCGACAC 
ACAACGTTCG TACTGGGTTT TTAGACGACG TTGACGACGA TTTGAATACG TTTGATGTAG 
ACGCGTCGGC TCGGGCAGCG GCTGCGATAA AGCAGTACGA AGAAGAAGGT ATGAAAGATC 
GGAGCGACGA TCTAATTGCG GCCGAAATCC AGCGAATTCA ACGGGAAATT GAAGGAAGCA 
ACGTCGCAAC CAAAACCAAA CCGTCCAAGG TTGTGCAAAG CACTACCGAG TGGCCCGAAC 
ATTTGGCAGG AATGAAGCTG GGAAATATTG TAGCTCGTAT CCGAGATGGA AGTTTAGAAG 
TAAAGCACTT ATCAGAACGA AAGGCACAAC TCGACAGTAT TGGCTTTGAA TGGGGCGATC 
CCAAGAGGTT TCTTGACGTT CCGTTTGAAA AAGCTATGTG CGCCATGTAC GCATATTACT 
TGGTACGCGG TGACATGTTT GTGTACGAAG ATTTTGTTAT GCCGGAGGAG GATCCCTGGC 
CACAAGCCTT GGCTGGGTAC GAGATCGGCA AAACAGTCAT GCGATTGCGG GAGCTTCAGG 
ACTTTTTAGA AGCATACCAC CCCGAAAAGG TCAGTCTGTT ACGCATGATC GATTTTGTGT 
GGTTCCCCAC AATGGCATTG CCTCTCGATC CAGATGAACC AGAATTGACC AACGAGACTC 
TGCTTTTAAG CGCTCTTGGG CATCCAGACT ACGCGAAAAT GATTGACATT CCTATGGGTC 
TTCCAGACAA GATTGTAGCT GATGGACCGT TCGTGGAAAG CGACAACCCA AAGCACTGGT 
GGCGTAAGTG GCACAATTGG GATTATGTCC AAAACTATTG GTACCAACAA GGCCGCCGAG 
ATAATGCTTT TGTACTTAAA GGAATGGGTT ACCCTCAAAT GGCGAAGGAG CACGAAGCCA 
AGTACGGTCC AGGGCTGTTT ACACAAATGG AGGAAACGAT GGCAGTTCTG GAATCTGGTA 
TTGAAGAAAA GTCATTAGAC GAAAAGAAGG AATTGCTTCA AACCCTACAC TTTTACCGTC 
AGGAGATGCT CGGATGTACT GATATCGCCG CCTGGGATCG AAATCAATGG CTAGCCGATC 
TGGACACAGA AATGCTTAAA ATTATGAAAG ACTCAAATCT TGAAATTGAA TTGGATGTTG 
ACGAGGACGA GGGGTACGAC GACGAGGCAA TAGATGGTGA AGAATATATT GAAGACGAGG 
ACTACGAGGA AGAGGAGCCC GAAGAAGAAG AAGAAGACAA AGAAGAGTTT GATGTAGAAG 
ACGAGCTTGG CTTGTCGGGC AAGCAATAGC ATCTTGAAGC TACAGCCGAC GCGAAGCAAG 
TGTGACAATA AAACTGATTT ATCATGTGTT GGCACAATTC AAGTAGTTCA GCTTACAAAG 
GCCATATTTT GCGAGACGAA ACCAATAGCT CCTAAAAGCT AAGGTCATCC GTCTCCTGCT 
GTGTCTTTCT ACCGCCAACC CTTTTGACGC ATGTATGTTT ATCTCTAGTC AACTTAGCGC 
CGCGGGCTTT GAGCGCTGGT TGCCCTTTGC GATAGACTGC CACATAGCTA CACCCAACTA 
TGAGGATAAC TAGAGCCACA ATGAGCACCC AAAAGCCAGC CGATAAGCTG AAGTCGTCAT 
CGGAATTCAT TGCTTCGCCA AGACGAGACA AGGCAATGGG AACGAAAAAA TCCCCCGAGG 
TTTCCAAATC ACGACCTCCA CGAAGGTTGC GGCCATCGAA TGCAATCACA ATCGTCCCTG 
ATGCCAAAAG AGAGTCCGGC CGGCCTGACA TAAAGAAAGT GGAGTCCACC GGTGTGCGAA 
CTTGGCAGGA CATTCCTGAG CAAAAGGCGC TTGTACCTGT AACACGAGTA CCGGCATCGT 
CGATAACCAC TGTATTGCTG CTACCTTGTC CCAAATTGAG GTTGCTGACA CCAAGAAGGC 
GCGCCGTACT ACTGGTGATG CACAAGCCCA GAACATCGCC CATTTCCAAA GGATCATTGA 
TACACTTGCT ATCTACATCG CAAGGACAGC CCTGAAGAAA TTCAGTTTCG AAATTACCCC 
GTTCCACATT GGGAGAGCGA GAAGCATCAA CGTTGGCAGC ACTCGGTTGT ACAGCCTCGG 
TCGGGCTTAT CGTAGGAGAC TCGCTGGATT GTTCCAGGTC AACTACACGG TCTCGCCAAA 
CACAAGGAGA GTATTTTCCG CTGACGAAGC CCAGCACTGC GTTGCATTCC TCCTTGCTTA 
TATCGGACTC ATTGCTATGA CGACAAACCC TCCGATCAAG AAAAGGGTCC ACGCTGTCGG 
AAACTGGAAG CCCGCAAAAA GGGGTGGTGT CCTGAAATAC CCTGACACTT CCCACGATAT 
CCCGATCATC GTTGCGTTTC CGCATCGAAC CCGACACAAT CACGGATCCT CCAGCATTCA 
TCGAAACATC ATTCCCCCAC CAATCAATAG TAGCATTGCC CAGTATAGTC TCAATCAGCC 
TATACGTGTT GATTTTTGTA TCCCATTGAT ACACCTGAAC CAAACCAGTA AAACGTTCGT 
GGTGTAGACT GGTAATTGCA ATTCGATTTC CATCGGCAGA CAGCGCAAGA GCCCGACCGA 
ACCGGTCGTT GTCGTCTTTC CCAAGTATTT CGTCCAGTTG AATCCATTGA CTCGTTTCGT 
CAAGATCGTA AACGTGGACG GAGCCACGAT TGGCACCGGC TATAGCTGAA GTTGGAGCGC 
CCACAATCAA AGTTGAGGAC CGAATGGCAA TCGAATATCC GAATTGACCA TCAACAATAG 
CAGAATTGCC TACTATGTCT TTGCCCACTG TAGAAAAAAG GTTGGGTGTT GAGGTGGAGA 
TCCGC 

 

Protein sequence

MKAIHVGVPR YCRALSFDND TSTVSSHNNN SHRIPISTTT TTTVRTTTTS TRLLRKITVR 
SVIVAFSCAA LWLQLDPPLF VAAFAPGTCT TVTTTATVAR VLPYALRTVT TKPYRLAHSQ 
PVPLHPHHRI DGVPLAATAR ETGSTAKDDD TAEWRAVLAA LTLYQAAFGD VKVPQKFIVP 
TASPWPKPAW GLKLGKVVAN IRLTGKYIHG RDKRKQALEK LGFLWAARST PQTRAEAEDD 
RSNVTVEQIL AALVAYRENV APLGPVPAKY IVPDAEPWPE RVRGLPLGSQ LARLPMDQLP 
ETIQAKLQDL GVMERYMPLA SSGSMGAPPT APVVSGEAYQ SASNVPPTAN DIRFHKVYLA 
LRTYKDVYGD LLVPQPFAVP SKAPWPQETW GLRLGARVNA VRSQGTFVNA NPDRRQALDD 
LGFVWSPPKE GSRRVKSREA NSLPDTAIPA SATTKNSLDS LLDDSTFDFG QDFMDQGGDG 
RDGLGGGSAT APTWGLEGGR LLPVEEAAAA AQAAAEEEYA PPRTLQESLD EATVRAMECG 
VIEGLTDRKR VMKGKREKAI PWFNDDFGDD FVFEDVVEAL SLYKRMYTDF DNLTASEEFV 
VPTHNVRTGF LDDVDDDLNT FDVDASARAA AAIKQYEEEG MKDRSDDLIA AEIQRIQREI 
EGSNVATKTK PSKVVQSTTE WPEHLAGMKL GNIVARIRDG SLEVKHLSER KAQLDSIGFE 
WGDPKRFLDV PFEKAMCAMY AYYLVRGDMF VYEDFVMPEE DPWPQALAGY EIGKTVMRLR 
ELQDFLEAYH PEKVSLLRMI DFVWFPTMAL PLDPDEPELT NETLLLSALG HPDYAKMIDI 
PMGLPDKIVA DGPFVESDNP KHWWRKWHNW DYVQNYWYQQ GRRDNAFVLK GMGYPQMAKE 
HEAKYGPGLF TQMEETMAVL ESGIEEKSLD EKKELLQTLH FYRQEMLGCT DIAAWDRNQW 
LADLDTEMLK IMKDSNLEIE LDVDEDEGYD DEAIDGEEYI EDEDYEEEEP EEEEEDKEEF 
DVEDELGLSG KQ