| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44863 |
|---|
| Symbol | |
|---|
| ID | 7199795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | + |
|---|
| Start bp | 470670 |
|---|
| End bp | 473540 |
|---|
| Gene Length | 2871 bp |
|---|
| Protein Length | 956 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178782 |
|---|
| Protein GI | 219115974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTCTT TCCCCCTACG TCGACTCGAA GTCTCGCTCC TTCGCGACGA CGACGATAGC
GGAGGAAGCC ATACACGACG AGCCTTCTAT TCTGGACGTC CCGAATCCAC CCCGCAAATA
CCGCTGTCGG AATATAAGCT CCCCAAGCTC CCCGCAACCT TCTCCCGTCT CATAGAAGGT
CCCCCCATAC AATTCGGTAC GGGAAAACTA GCCCGTCTCA CGCATTCCTC CGTCGTGGGA
CAGGGCGGAT CGACCGTCGT TCTCGCAACG GTCGCACACC AGCCACCGGA TACACCCAAT
GGGGATCAAA ACAACGCCGC CTCCACTTTT CTCACCGTCG ATTACCGCCA GCGATACCAC
GGTGTGGGGA AAATCCCGTC CAACGGAGGA CGGCGGGATA ACGCCGTTCT GTCGACCCCT
GAAGTTCTCG CGTCCCGTGC CATCGATCGG GCCCTCCGAC CTCTAATCCG CACGGAGGAC
GCTATCGATG GACGTCTGCA CGTTACGTGT TCCGTACAAT CCTACGAAGT ATTCGCATCC
GAGGTTGATC TAAGGCAGGA TGGACTACTC GACGAGAAAG ACAACGACGC GACTAACGCT
TCACACTCGA CCCATCCCGT CGCGATGGCG TTGAATACGG CGGCAGCGGC ACTACTACAG
CAAGGGCACT TGACCCAACC CGTCGCCGCT ACGGTCCTGG CCGTAGCCGC GCACGGCGAC
GGTGTGGTCT GGCAAGACCC CGTGCCGGAA CAATTGGCCG ACTCGTACGG GGAACTCCTG
TACGCGGGTA CCGCGGACGG ACACGTCGTC ATGTTGGAAT GGACTTCGCA CCGACTGGCG
ACCGGGTTAT CGGAATCGCA CATGACACAA CTTTTGGAAC TCGCACAAAC CTCCATCCGA
CCCGTTCTCG ATCTTTTGAC GGCAAGGTTT GGGGACGTTC CTCACAACAA TAACTCCTCC
AGTATCGGCT TATCCGCTAC GGACCGGTGG CTCGAAGAAA ATCAACTGCG ACAGAGTTTG
GGATTGGATC CCATTCCGCA AGACGAAGAA GCAATAAATT TGCCTAGCGT GGTCGCGTCC
AATACCACTC AGGCGCGGTT GCCCGACATT ATTCAACACG TGCAAACTTG TATAGGTCAC
GTGTTGCCTC GCCTTTTTGG ATGGGACGCA ACCTTGCCGG CTGACACCGA AACCGACCGA
AACAACGAGA AAAACAGAAC GGTGGTGGAC CAGTCGATGG GAGCGGCTAT TCATCGAGGG
GACTTGCCTT CCAAAACCGT CCGCGGTCGT CGAGAACAAA TTGTACAAAC CGAAATAGCT
CGTCTCGTGG AATCTTATGT AACCGCCGCC GGCGATGCAT TCGAACCCAG AGAATTGCAG
TGGCTTTCGG AACAAACCAC GAAACACTTA CTCCAGAAAG GCTTCGTCCA GTCTGCTCTC
CAAGGTGGCG CTCGTGCGGA TGGACGTGGG TTGCCGGGAC ACGGCTGGAA GACGATCCGT
CCCCTCAAGG TACAAATGCC AGCACTGCCC GACACCGTGC ATGGTTCGGC CCTCTTTGCT
CGAGGCGATA CTCAAGTTCT CTGCACCGCC ACCTTGGGCC CGCCCGGCGA TGGGCAACCC
ATGAAAGACC CTTACCTGGC TACGGACAAT CCCAGACGCG TCAAATCGGG AGCCGAAACG
ACGGCGGCGG GCTACTACAG TGAGCTCCCG GTGGGATCTT TGCGCTTTCT GCGCACCCAG
GAAAGTTTGG TTTCGGACAT GAACTCCCGC AAAGTTAAGG CCGACAAGGA ACGTACCGGA
GACTCGGGTA GTCTCGCGGA AGTCAAACGA GCCTTTTTAC AGTATGATTT CCCGCCCTAC
GCCACCGGGA CAGTTCCCAT CGGAAGTCAG GCACACAATC GGAGAGCCAT CGGACACGGC
GCGTTGGCCG AAAAGGCCTT GTTGCCTGTT TTGCCCGACG CGCACGACTT TCCTTACGCC
ATTCGGATTT CAAGTGAAGT GACTGACTCG AACGGCTCGA GCAGTATGGC CTCTGTGTGC
GGTGGGACCT TGGCTTTGTT GGATGCCGGG GTGCCGATTC AAATGCCCGT CGCCGGTGTG
AGCGTGGGAC TGGCGCGAGA CGTGGATGCG GGCGAGGCCG GTGTGCACCG ACTGCTGTTG
GACATAACCG GAACGGAGGA CTACTATGGA GGGATGGATT TCAAAATTGC TGGTACACGG
AAAGGTATTA CGGCGTTTCA ACTCGACGTT AAGCAACTTT TGCCGCTAGA AATTGTCACC
GAAGCTTTGC AACTAGCTTG TCGCGGAAGA AACGTTATTC TGAACGAGAT GCAGGATCAG
TGCTCTGACG GTTTGAAGGC TCGGCCGTCG CCCAAGGATA GCGCACCACG AGTGGAAGTC
GTCCGCTTTA ATCCACAGCG CAAACGAGAT TTGGTAGGAC CAGGAGGTAT CATTTTGCGG
CAACTGGAAG ATCGCTACGG TGTGGCTTTG GACTTGACGC AAGAAGGTCG TTGTCTTTTG
TTTGGGGCCG ACCAAGAATT GGTCGATCAA GCCAAACTTA CCGTCATGGA CCTGGTTGCC
GACGTGGTAC CCGGAGAAGT CTACGAAGGA ACCATTATTG AAATTAAGGA TTTTGGTGCA
ATTGTGGAAC TTTTACGCAA TAAAGAAGGG CTCCTGCACG TGAGTGAATT GACCAACGAA
CAAGAAGCTG GCGATCACCC TGGTGGCATT GCCGGATTTG TTCGGCAGTA TCTCAAGGAG
GGTCAGAAGG TGGAAGTGCT GTGTACAGAC GTCGATCCCG TACAAGGAAG CATCAGACTT
AGTCGCAAAG CAATTTTGGT TAAAGAACAG AAGAAAGCAA TGCGTCGTTG A
|
|---|
| Protein sequence | MESFPLRRLE VSLLRDDDDS GGSHTRRAFY SGRPESTPQI PLSEYKLPKL PATFSRLIEG
PPIQFGTGKL ARLTHSSVVG QGGSTVVLAT VAHQPPDTPN GDQNNAASTF LTVDYRQRYH
GVGKIPSNGG RRDNAVLSTP EVLASRAIDR ALRPLIRTED AIDGRLHVTC SVQSYEVFAS
EVDLRQDGLL DEKDNDATNA SHSTHPVAMA LNTAAAALLQ QGHLTQPVAA TVLAVAAHGD
GVVWQDPVPE QLADSYGELL YAGTADGHVV MLEWTSHRLA TGLSESHMTQ LLELAQTSIR
PVLDLLTARF GDVPHNNNSS SIGLSATDRW LEENQLRQSL GLDPIPQDEE AINLPSVVAS
NTTQARLPDI IQHVQTCIGH VLPRLFGWDA TLPADTETDR NNEKNRTVVD QSMGAAIHRG
DLPSKTVRGR REQIVQTEIA RLVESYVTAA GDAFEPRELQ WLSEQTTKHL LQKGFVQSAL
QGGARADGRG LPGHGWKTIR PLKVQMPALP DTVHGSALFA RGDTQVLCTA TLGPPGDGQP
MKDPYLATDN PRRVKSGAET TAAGYYSELP VGSLRFLRTQ ESLVSDMNSR KVKADKERTG
DSGSLAEVKR AFLQYDFPPY ATGTVPIGSQ AHNRRAIGHG ALAEKALLPV LPDAHDFPYA
IRISSEVTDS NGSSSMASVC GGTLALLDAG VPIQMPVAGV SVGLARDVDA GEAGVHRLLL
DITGTEDYYG GMDFKIAGTR KGITAFQLDV KQLLPLEIVT EALQLACRGR NVILNEMQDQ
CSDGLKARPS PKDSAPRVEV VRFNPQRKRD LVGPGGIILR QLEDRYGVAL DLTQEGRCLL
FGADQELVDQ AKLTVMDLVA DVVPGEVYEG TIIEIKDFGA IVELLRNKEG LLHVSELTNE
QEAGDHPGGI AGFVRQYLKE GQKVEVLCTD VDPVQGSIRL SRKAILVKEQ KKAMRR
|
|---|
| |