Gene PHATRDRAFT_44775 details

Gene Information

• Locus tag: PHATRDRAFT_44775
• ID: 7199740
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 208820
• End bp: 210802
• Gene Length: 1983 bp
• Protein Length: 580 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002178726
• Protein GI: 219115862

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00959094
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTGCTGTAA ACTAGTAGGC TACTTAATGT AAATCCTCTC ACAACAAGGT GTGTAGGTGT 
ATTGTCTGGA TTGGGTTGGT ACTATATGGC ATAGCTTTCC TAGCTAGTAG TTAGCGTAAC 
AAAACCCGGA CCTTCCGTCA AAGAACCCAA AGCAAGCATC TCCAGATCAC ACACGAGTGT 
CGATCGCTGT CACAGTCAGT TTGATGTTCG TTTGCTTTTT ATTATTCGAC GCCATCTACG 
ATGGCGGACT GGTACAAAGC CTCGCTCGGC GATATTCCCG TGGACGAAGT ACACAAAGCC 
AAAAAGGATG AAATTAGGTT TTGTTCCCGT CGATCTCCCG TGCTTTGTCG ACACGCCTGT 
GTGACAACCA GTCAACCTCT GGCTACTAGT ATCGGTGTTG ATTTCTTGAG ACGACACGCC 
AACGCTGCCG ATACGGCTGT CGCCGTCGCG GCTGCTTTGG CTGTAACCGA GCCTTGTTCG 
ACTGGATTGG GAGGCGATAT GTTTTGTCTT TATTTCGATG CGGCGACGAA AGAAGTGATG 
TGCGTCAACG GCAGCGGAGC AAGTCCAGCC GATCTTTCTT TGGATCTTCT GAAAAAAACG 
TATCCAGATG GACTTGGTGG AGTCAACGAA GCTATGTTTC GGGACTCTCC GCATGCCGTA 
ACGGTTCCTG GAGCAGCACG GGGCTGGGAG GACTTGTTGA GCAAACATGG TTCGGGAAAA 
TTCACGCTAG CGCAGCTGTT GGAACCATCC GCGGTTTTGG CGGAGGAAGG TTTTCCGGTA 
GGGCCCGTAA CGTCTTATCA CTGGAAAGCG GGCATACCAC AGATTCGGAA ATGGCTGCTA 
GAAAATGAAT CTGTGCCGCT CACTATCAAT GGTCGCGATG GTCCGGAACC GGGCGATTTG 
ATCTATAATC CCGACTTGGC TCGAGTCTTG CGCAATCTTG GCAAGCAAGG TTCCAGCCTA 
GGATTTTACC GAGGAAATCC GGGACAAGCA ATTGTTGATA TCATCCAGAA ACATGGAGGA 
ACCATGACCT TACAAGATTT GGCGATGCAC AAGTCTGACT TCCCGGAAGC CCTGTCGGTG 
GAATATCGTG GATGTAAGCT TTGGCAACAC CCTCCCAATG GACAAGGGGT CGCTGGTCAA 
ATTGCACTGG CCGGTGTCGA TTGCCTAGAG CAAACCGGGA AGTGTCCCAC GATAACTCCC 
GAGACGATAG GTAACGCAGA TTCCTATCAC GTCATGATGG AAATGATGCG ATTGGGCTTT 
GCAGATGCTC GGGCATACGT TGCCGACCCT GCAAGTATGA AGGTGGACAA CAAGTTTCTG 
CTCAATACGG ATCGAATCGG TTCGCGTGCC GAACAGTTGT TTAACCCGGA AAAAGCGGCA 
ATTGCGGGAC TTCCGGATGC GTCGAATTGT ACCGTGAGTT TTCAAGTAGT TGATGAAGCA 
GGAAACGCCA TATCATTCGT GAACAGTAAC TTTATGGGCT TTGGGACCGG GCTTGTACCC 
GAAGGCTGCG GCTTTACACT ACAAAATCGA GGATTTGGTT TCAACCTCCA AGAAGGACAC 
CCGAATCAAG TTGGAGCTTC CAAGCGCCCT TACCATACGA TCATTCCCGG TGTTTTGACA 
CATTCAGACA CTAGTGAGCT GTACGCGACC ATTTCCAACA TGGGTGGCAA TATGCAACCG 
CAAGGACACA TGCAGCTAAC GATTGATATG CTTGCCGGAG GCATGGATCC GCAACAGGCG 
ATTGACATGC CACGATTCTG CATAGCGGAT GGCACCCAAG CTGGTGTTGT CTTTATGGAG 
GAGGGTGTGA AGGAAGAAGT CTTATACGAA TTGAAACGGC GTGGGCATAT AATTCAGTCC 
AACCAAAGTG GGCACGAAAG AAGCACTTTC GGGCGGGCGC AAATCATCAA ACGTGACCGC 
GCTACGGGAG TTCTATGGGC CGGTTCCGAT GGTCGAGCAG ATGGGTGTGC TATGGGGTTT 
TGA 

 

Protein sequence

MADWYKASLG DIPVDEVHKA KKDEIRFCSR RSPVLCRHAC VTTSQPLATS IGVDFLRRHA 
NAADTAVAVA AALAVTEPCS TGLGGDMFCL YFDAATKEVM CVNGSGASPA DLSLDLLKKT 
YPDGLGGVNE AMFRDSPHAV TVPGAARGWE DLLSKHGSGK FTLAQLLEPS AVLAEEGFPV 
GPVTSYHWKA GIPQIRKWLL ENESVPLTIN GRDGPEPGDL IYNPDLARVL RNLGKQGSSL 
GFYRGNPGQA IVDIIQKHGG TMTLQDLAMH KSDFPEALSV EYRGCKLWQH PPNGQGVAGQ 
IALAGVDCLE QTGKCPTITP ETIGNADSYH VMMEMMRLGF ADARAYVADP ASMKVDNKFL 
LNTDRIGSRA EQLFNPEKAA IAGLPDASNC TVSFQVVDEA GNAISFVNSN FMGFGTGLVP 
EGCGFTLQNR GFGFNLQEGH PNQVGASKRP YHTIIPGVLT HSDTSELYAT ISNMGGNMQP 
QGHMQLTIDM LAGGMDPQQA IDMPRFCIAD GTQAGVVFME EGVKEEVLYE LKRRGHIIQS 
NQSGHERSTF GRAQIIKRDR ATGVLWAGSD GRADGCAMGF