Gene PHATRDRAFT_34576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34576 
Symbol 
ID7199517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp948391 
End bp949392 
Gene Length1002 bp 
Protein Length333 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179096 
Protein GI219116602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.288806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAC TGGCTGAGCT GACACTTTTG GAGAAGTTGG GATACAATCG CATTGATGGA 
CCAGCTCCTT TGGTGAAGCA GTGCAGATAT TGGCAAGCCC AAAAGCCAAT GGAACACTGT
GAGGACGCCA TGCTCAACTG GGCCATTAGC CCATCATCAC AGCAATACCC CACACCGGCG
TTGTGGCAGG GAGGTGGCAA TTGGGGGGAT TTGTGGCCCA AAGCTCATAG TCCTCGAGAA
AAGTCGATGG AACCGCTGCT GCGAAACAAC TATACGGTGG TTTCCATGCC CCAGAGTCTT
TACTTTCAGA ATCCAAACAA TGAAGTTCAG TTGACTTCGG CTATGAAAGG AAGTATTGCA
CGTGGCCTGG GCCGGGACGA TCACTTTCTG GATTCGAACG AGGGCCGCAA GCAAGCCGCG
GCACGCGTTG TCCTTTCTTG GCGAGAGCAC GACAGCTACG ACAAAGCGCA ACAATTGTAC
CCGTTTGCTA CACACATACT GGTGCCTGAC AGTGCCTTTC AGCTAGGACC ATTCTCACCA
ATAGTTCCAG AAGACGAATC TTTGAAGGTA GATATAGTTT TGTTTCTCCG GGATGATAAA
GAGTCCAAGT ACATGCCGCA GCGCAATCGG CGTGCCATTC AAGAAATCCT ATCAAAGGTA
CCCAATGGCA AGAACTTGTC TTTTACAATT GTGGACTGGT CCGATCGCTT GAAACTATTC
AATTCAAAAG ACATCCTTTT CACAAAGACA GCCATCCAAC TCATGAGTAT AGGGAAAGTG
GTCGTCTGCG ATCGACTTCA CGCTGCCATT TTGTCGTATT TGACGGGAAT TCCTATTGTG
TACCTTGATC AGCGTACGGG TAAGACCACC AAGACCTTTC GCGTGGCATT TGAGCTAGAA
GACGGTTGCT TGGATGGAAC AAAGGCCATG TGGTCTCAAG CATTGAATCT GACCGACGGC
ATTCGGCAAG CTGTGGGTTT CCTGGATTAC TACGGACTTT AG
 
Protein sequence
MITLAELTLL EKLGYNRIDG PAPLVKQCRY WQAQKPMEHC EDAMLNWAIS PSSQQYPTPA 
LWQGGGNWGD LWPKAHSPRE KSMEPLLRNN YTVVSMPQSL YFQNPNNEVQ LTSAMKGSIA
RGLGRDDHFL DSNEGRKQAA ARVVLSWREH DSYDKAQQLY PFATHILVPD SAFQLGPFSP
IVPEDESLKV DIVLFLRDDK ESKYMPQRNR RAIQEILSKV PNGKNLSFTI VDWSDRLKLF
NSKDILFTKT AIQLMSIGKV VVCDRLHAAI LSYLTGIPIV YLDQRTGKTT KTFRVAFELE
DGCLDGTKAM WSQALNLTDG IRQAVGFLDY YGL