Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34576 |
Symbol | |
ID | 7199517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 948391 |
End bp | 949392 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179096 |
Protein GI | 219116602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.288806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACAC TGGCTGAGCT GACACTTTTG GAGAAGTTGG GATACAATCG CATTGATGGA CCAGCTCCTT TGGTGAAGCA GTGCAGATAT TGGCAAGCCC AAAAGCCAAT GGAACACTGT GAGGACGCCA TGCTCAACTG GGCCATTAGC CCATCATCAC AGCAATACCC CACACCGGCG TTGTGGCAGG GAGGTGGCAA TTGGGGGGAT TTGTGGCCCA AAGCTCATAG TCCTCGAGAA AAGTCGATGG AACCGCTGCT GCGAAACAAC TATACGGTGG TTTCCATGCC CCAGAGTCTT TACTTTCAGA ATCCAAACAA TGAAGTTCAG TTGACTTCGG CTATGAAAGG AAGTATTGCA CGTGGCCTGG GCCGGGACGA TCACTTTCTG GATTCGAACG AGGGCCGCAA GCAAGCCGCG GCACGCGTTG TCCTTTCTTG GCGAGAGCAC GACAGCTACG ACAAAGCGCA ACAATTGTAC CCGTTTGCTA CACACATACT GGTGCCTGAC AGTGCCTTTC AGCTAGGACC ATTCTCACCA ATAGTTCCAG AAGACGAATC TTTGAAGGTA GATATAGTTT TGTTTCTCCG GGATGATAAA GAGTCCAAGT ACATGCCGCA GCGCAATCGG CGTGCCATTC AAGAAATCCT ATCAAAGGTA CCCAATGGCA AGAACTTGTC TTTTACAATT GTGGACTGGT CCGATCGCTT GAAACTATTC AATTCAAAAG ACATCCTTTT CACAAAGACA GCCATCCAAC TCATGAGTAT AGGGAAAGTG GTCGTCTGCG ATCGACTTCA CGCTGCCATT TTGTCGTATT TGACGGGAAT TCCTATTGTG TACCTTGATC AGCGTACGGG TAAGACCACC AAGACCTTTC GCGTGGCATT TGAGCTAGAA GACGGTTGCT TGGATGGAAC AAAGGCCATG TGGTCTCAAG CATTGAATCT GACCGACGGC ATTCGGCAAG CTGTGGGTTT CCTGGATTAC TACGGACTTT AG
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Protein sequence | MITLAELTLL EKLGYNRIDG PAPLVKQCRY WQAQKPMEHC EDAMLNWAIS PSSQQYPTPA LWQGGGNWGD LWPKAHSPRE KSMEPLLRNN YTVVSMPQSL YFQNPNNEVQ LTSAMKGSIA RGLGRDDHFL DSNEGRKQAA ARVVLSWREH DSYDKAQQLY PFATHILVPD SAFQLGPFSP IVPEDESLKV DIVLFLRDDK ESKYMPQRNR RAIQEILSKV PNGKNLSFTI VDWSDRLKLF NSKDILFTKT AIQLMSIGKV VVCDRLHAAI LSYLTGIPIV YLDQRTGKTT KTFRVAFELE DGCLDGTKAM WSQALNLTDG IRQAVGFLDY YGL
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