Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34431 |
Symbol | |
ID | 7199593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 556486 |
End bp | 557271 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178802 |
Protein GI | 219116014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.362654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTAA AAGAGGCGAA AGTATTGACT TTAGGAGAAT CCACTAATCC AAAAGCACGG ACAACTTGGC CCTCTTTTCG TGTACACTTT GACGACGACG GATACGTCAC GTATCTTAAC CTCGGATCTT TTCGCTTGCG CAAGGGAATT GTGGGTCTCG ATGCATTTCG GATGTTTTCG AAACTCTCGA CTCTGAGCCT TGCAGGTACC GACTCTCCAC TCTCTGACCT CAAAGTAATT TTGGATTTGA TTACCTCAAC GATCGAGTGC CTCTATCTCG GTGGAAACGG ATACCAGACT CCGGTAACGC ACGTATTAGC CCCATGGATC GTCTCAGCTG CGCAGCTTGT CAAGTTGGAC CTTCGCTATA ACGACATGGA TAGCAGTGGG TTGTCAAGTC TTTGCGATGG CCTTGTAGGT TCCAATGTCA AGTCTCTTTA CCTCGAAGGA AATCGAATTA GCGACCTAGC GGCACTTGGA AAAGTCCTTG AGTGCAATTC GTGCAGAATC CAAGAGCTGT ACCTTGGATC CAACCGGGTA CATGCATTGG GTGCCAAGCA ACTAGCATCG TGTTTGATAA CAAACAGGAG TTTGAGAAAG CTTTACCTAG AGAGTAACAA CATCGGGACC GAAGGAGCGC TCGCATTTGT CATAGTGTTA CAGAAAGTAG CTGGAGAAGT TGCGCTGGAA AATCTATTTG TCGACAACAA CAACATCGAC AGAGAGGCAT TGAAACAATT GGCCAAGGCT TTAAATGAAT GTACAAACAT CAGAGATCTT CCATAG
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Protein sequence | MMLKEAKVLT LGESTNPKAR TTWPSFRVHF DDDGYVTYLN LGSFRLRKGI VGLDAFRMFS KLSTLSLAGT DSPLSDLKVI LDLITSTIEC LYLGGNGYQT PVTHVLAPWI VSAAQLVKLD LRYNDMDSSG LSSLCDGLVG SNVKSLYLEG NRISDLAALG KVLECNSCRI QELYLGSNRV HALGAKQLAS CLITNRSLRK LYLESNNIGT EGALAFVIVL QKVAGEVALE NLFVDNNNID REALKQLAKA LNECTNIRDL P
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