Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34241 |
Symbol | |
ID | 7199719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 107889 |
End bp | 109028 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178931 |
Protein GI | 219116272 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGA GAAGCGAGAG TATAGAGAAC TTGTTCCGGA AGCTGACTGT ATCTAAGCAA GAGCCGTCGC CGTCGGAGTC CACGACAACA CCACGTGAAC ATCCACCGTA CCTCTTCCTC CTCCAACATT CGAATGCAGC TCATCTTCGA CACGCCGCAG CTCAAGGCAC GTTGGAAGAT ACACTGTATC ACCGAGCTGG ACTGCGAACA CCAGCCGAAA ATGCTACTCG TGATTGTCAG GCCGGGACGC TCTGGATGCG TCACGTCGGA ACGACATTAC AAAAAACTGT CCCGCGTCTT ATATGGGTAC AGACGACCAG TATCAGTGGT AGCCAAGACA AGAGAAACGA GCGTGCTTCT AGGATCACTC CAAATCAAAC TACTGTCATT GATCTTTCGG TCGATCCATG GGGTTGGAAC GATTCCGACG CTCTCAATTT AAATTGTTTA GAGACACTAC TGCGTGTTTT GAAAGAAAAA GTAGCCGCGC AGAAAGACAC AAACTCCTCT GTGTTAGGAA CAATCGATGA TTACAGCAAT TATTGCGTTC CTATCATGTT CGATTCAATT TCTCCTCTTC TTGTACGGCA CGGCTTTGAT CGCATATTGA ACTTTCTCAC GTTGGTGTCG CGGATCCCAA CCGTGTGCCC ATTGGTGGTA CCGATTCGGA CGGATAGCTT GACATCAGCG CAACACTGTC GGTTGGAAGA TGCCTCGCAT GCAGTTTTGT GGCTGACTGG TGGTGAGGCT GTGCTTCTCC GTCAAGGGGT GCGGGAACGG GGGAACGTAC TACGTGAGGC CTTGTCCTAC CAAATTGTAA CTGATCGCCG TAACGGCCTG CAAACCATCC GTGTTCTGGA GCACGAAGAA GCGAGCTTAC CACGGACGGA TGGTGACGAT GACGTCGAAA ATAATGTCAA TGCGGGTCGT GGGCCAGTGA AGGGATCGTC GCGGTCAAGT GAGCGGCCAA AGATAAAGCT TCAATTGGAA GACGACGACG CAATTAGTGC GAAAGAAACG CCATCGATTA CCAATACAAC ATCTCAACGA GCACGTGCCC CTCAAATTAT CGTGCAAGAC GATGACCCCG AATTTGACGA TTACGACGAA GAAGATCCCG ACGACGATTT AGACATATAG
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Protein sequence | MTKRSESIEN LFRKLTVSKQ EPSPSESTTT PREHPPYLFL LQHSNAAHLR HAAAQGTLED TLYHRAGLRT PAENATRDCQ AGTLWMRHVG TTLQKTVPRL IWVQTTSISG SQDKRNERAS RITPNQTTVI DLSVDPWGWN DSDALNLNCL ETLLRVLKEK VAAQKDTNSS VLGTIDDYSN YCVPIMFDSI SPLLVRHGFD RILNFLTLVS RIPTVCPLVV PIRTDSLTSA QHCRLEDASH AVLWLTGGEA VLLRQGVRER GNVLREALSY QIVTDRRNGL QTIRVLEHEE ASLPRTDGDD DVENNVNAGR GPVKGSSRSS ERPKIKLQLE DDDAISAKET PSITNTTSQR ARAPQIIVQD DDPEFDDYDE EDPDDDLDI
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