Gene PHATRDRAFT_34217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34217 
Symbol 
ID7199706 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp47945 
End bp48783 
Gene Length839 bp 
Protein Length268 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178694 
Protein GI219115798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.105631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGC ACGATGTCGT TATTGTCGTA GCTCGCCATG GCGAGCGTAC AGACTACATA 
ATGCGCGATG CGGGGGAAAA TTGGGTACGG ACGGCGGCTC GTCCTTGGGA TACACCGTTA
TCGGCACACG GTCACACGCA AGGAACAAAG CTTGGCGAGC AGATAGCGAG CGAGCTGCAA
CGGCTAGAGT TGCCGGCTCT GACGCAGGTT TATTCTTCTC CACTGTTGCG ATGTCGACAG
ACGGCCGTGG CTGCTGCGCG GGCGTTTCGG GAAGCAACAC GCAGGTCGGA AGATTCGACC
AATCTCTCGC CAGCCGTTCT TTCTTCTCCG CTCGTGCGGA TCGAATACGG TCTTTCCGAA
AGTATCAACG AAAGCTGGTA TCGCTCTTGG TCATTGCCAG AATCAGACGG AACTTGGGGA
CTCCGACCGA AAGGCCAATC GAGCCCGATT CCAGAGACTC TCCACCCAGC CAGTCGTGCA
CCGGTTCAAG CCCTTTTGGA TTGGAAGACG ACTCTCGCCA CCCAGAACGA CATGGATCCC
GAAATGGATA CCAAATACGC TTCACGAACA CGCCTGGATA CTCCGTATAC TTTTCATCCT
CCCTACATGG AAGCCCGGAC GGATCAGCGA GAACGAATGC GTAAAGCGGT CGAAGAGTTG
TCGGTGGCGG GCCAAACGAT TTTACTCGTC TCTCACGGGG GACCCGTAAC ACACCTTTAC
GAAGAGCTTA CTGGCAACGA TTGGAATGTA CATGGCGCTT CGTCCTATTG CTGTTACAGC
ATTTATCGCC AGCCAGCTGG AACGAACAAG TGGGAGGCGC TGGTGATCAA CCAGTCTGA
 
Protein sequence
MNPHDVVIVV ARHGERTDYI MRDAGENWVR TAARPWDTPL SAHGHTQGTK LGEQIASELQ 
RLELPALTQV YSSPLLRCRQ TAVAAARAFR EATRRSEDST NLSPAVLSSP LVRIEYGLSE
SINESWYRSW SLPESDGTWG LRPKGQSSPI PETLHPASRA PVQALLDWKT TLATQNDMDP
EMDTKYASRT RLDTPYTFHP PYMEARTDQR ERMRKAVEEL SVAGQTILLV SHGGPVTHLY
EELTGNDWNH LSPASWNEQV GGAGDQPV