Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34217 |
Symbol | |
ID | 7199706 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 47945 |
End bp | 48783 |
Gene Length | 839 bp |
Protein Length | 268 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178694 |
Protein GI | 219115798 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.105631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCGC ACGATGTCGT TATTGTCGTA GCTCGCCATG GCGAGCGTAC AGACTACATA ATGCGCGATG CGGGGGAAAA TTGGGTACGG ACGGCGGCTC GTCCTTGGGA TACACCGTTA TCGGCACACG GTCACACGCA AGGAACAAAG CTTGGCGAGC AGATAGCGAG CGAGCTGCAA CGGCTAGAGT TGCCGGCTCT GACGCAGGTT TATTCTTCTC CACTGTTGCG ATGTCGACAG ACGGCCGTGG CTGCTGCGCG GGCGTTTCGG GAAGCAACAC GCAGGTCGGA AGATTCGACC AATCTCTCGC CAGCCGTTCT TTCTTCTCCG CTCGTGCGGA TCGAATACGG TCTTTCCGAA AGTATCAACG AAAGCTGGTA TCGCTCTTGG TCATTGCCAG AATCAGACGG AACTTGGGGA CTCCGACCGA AAGGCCAATC GAGCCCGATT CCAGAGACTC TCCACCCAGC CAGTCGTGCA CCGGTTCAAG CCCTTTTGGA TTGGAAGACG ACTCTCGCCA CCCAGAACGA CATGGATCCC GAAATGGATA CCAAATACGC TTCACGAACA CGCCTGGATA CTCCGTATAC TTTTCATCCT CCCTACATGG AAGCCCGGAC GGATCAGCGA GAACGAATGC GTAAAGCGGT CGAAGAGTTG TCGGTGGCGG GCCAAACGAT TTTACTCGTC TCTCACGGGG GACCCGTAAC ACACCTTTAC GAAGAGCTTA CTGGCAACGA TTGGAATGTA CATGGCGCTT CGTCCTATTG CTGTTACAGC ATTTATCGCC AGCCAGCTGG AACGAACAAG TGGGAGGCGC TGGTGATCAA CCAGTCTGA
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Protein sequence | MNPHDVVIVV ARHGERTDYI MRDAGENWVR TAARPWDTPL SAHGHTQGTK LGEQIASELQ RLELPALTQV YSSPLLRCRQ TAVAAARAFR EATRRSEDST NLSPAVLSSP LVRIEYGLSE SINESWYRSW SLPESDGTWG LRPKGQSSPI PETLHPASRA PVQALLDWKT TLATQNDMDP EMDTKYASRT RLDTPYTFHP PYMEARTDQR ERMRKAVEEL SVAGQTILLV SHGGPVTHLY EELTGNDWNH LSPASWNEQV GGAGDQPV
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