Gene PHATRDRAFT_34216 details

Gene Information

• Locus tag: PHATRDRAFT_34216
• ID: 7199705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 46789
• End bp: 47487
• Gene Length: 699 bp
• Protein Length: 232 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002178917
• Protein GI: 219116244

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0476745
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGGCA CGGGGGTCAC GAATTACGAC TCCAAGCCGT CGTACGGCTT TTCGGCGGCG 
ACCACCGAAT GGGACGACGC GCTCATGAAA CGCGGTATTC GTACCCACGA ACAAGCCATG 
ATTGCCAAAG GTGCTTCGCC AGCAGAGGCT TCTAGGCTCA CACAATTGAG AGAAGGCACA 
GACACAAACC GCGAAACAGA GTGGGATACC GGAAAGCAAA GTCCCGACGA AGGGGACGAG 
TCCGATGACG AAGATTTTCT GGACGACGAC TTTTTGGTCC AATACCGGCA ACAGCGTCTA 
CATGAACTTC AATCCGAACA AAGTGCAAAG ACGAAGAAAG GCACAAATTT TGGAGCAGTG 
ATTCCGATTT CTCGTTCGGA ATGGACGCGG GAAGTGAACG AAGCGTCACA GGAAAACGGA 
GGGATTTGGG TTATCGTTTG TTTAACAACG AGCGATACGG AACGTACGGG TGCTGTTGAA 
CACGCCGTAC GGGAGTTGGC GTTTGTTTGT ACAAAGCTCA AGTTTGTGTC GATACCATCC 
CATCATGCCA TTCCAAATTG GCCCGAATCC AACCTACCGA GCTTGTTTTT GTACCGCAAC 
GGTACCATGC AGCATGAGCT ACTAAGACTC CCGCAAAATA CGAATAAAGA CGATCTGGAA 
GAGCATTTGA AACAGCTAGG TGTTTTGGAC GATACCTAG 

 

Protein sequence

MQGTGVTNYD SKPSYGFSAA TTEWDDALMK RGIRTHEQAM IAKGASPAEA SRLTQLREGT 
DTNRETEWDT GKQSPDEGDE SDDEDFLDDD FLVQYRQQRL HELQSEQSAK TKKGTNFGAV 
IPISRSEWTR EVNEASQENG GIWVIVCLTT SDTERTGAVE HAVRELAFVC TKLKFVSIPS 
HHAIPNWPES NLPSLFLYRN GTMQHELLRL PQNTNKDDLE EHLKQLGVLD DT