Gene PHATRDRAFT_26635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_26635 
Symbol 
ID7199498 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp857306 
End bp858563 
Gene Length1258 bp 
Protein Length374 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178861 
Protein GI219116132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.163069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGACGAACAA TTGTACCATG TTATCCAGTT CACGTTGGGG ATCCGCATTC GTCTGTTTTC 
TCGCGTTGGC GTGTAGCAGT AGCTACCGCA CACAGGCGTT CATCGTTCCG TCCGGGACGT
CGTCGCGCGT TTCGGTCGCC GTGCGCAGCT TGCCTCCACC CCGAGACATT GCCTACGGTG
AAGAATCGCG CAAATACCGT CGGACCGTGT ACACACACGA CGACTGGGTC AATCACCGTT
CACCTGATCG TTTCTGGCGC AACATTATCG CCATGCCGAC TTCCGGAGTG TACAAGAACT
TGGCCAAGGA GTGCATCGCC ACCACGGCAG TTGCCACGGC TATCGTCGTG TACAATGCCC
TCGTAGGGGG ATACACCGAC TTTGGGGGAG TGCAACACGC TGCCGTTTTA CAAAACGAAC
TATTGCCCAA AATTGGAATG CCCGTGTCAC CTTTTACCGT CTCGGGATCC TTTTTGGGCT
TTTTGCTCAG TACGTATGAG TGTGCAAATC TATACCCGTA CTCCCTTGCC CGCCATCCTT
CCGTCTCACC GTTTCGTTAA TGTTGTTGTT GTTGCTTTGT CCCTCTATGG AATCATTGTA
TCTACTAGTT TTCCGGACCA ACTCTTCGTA CAAGCGTTGG GACGAAGCAC GTAAGAACTG
GGGAATGAAT ATTAACCACA CGCGCGATCT CGTCCGCATG GGGACCGCCT TTTACGACAA
GACGGGAGTG ACCGATGAAC AGCGCAAGAA GGATCTGCAA GCCCTGAGTC TCGCTACCTG
GAGTTTCGTC CGCGCCATGA AGCGGCACCT TTCCCCCGAA CAAGAAGACG AGCAAGACTT
CCGCCGGGAA CTCCACGAAC GCCTGCCACC CCGCCAGGCC CAAGCCATTA TCGACGCCGC
TCACCGCCCC AACCGAGCCC TCTTTGACCT TTCCGTTGCC ATTGAGAATC TGCCCATGCA
CTTTATGCGA AAAAATGAAA TCCACAACGC TGCCACCATT TTCGAAGACA ACCTCGGTAG
CAGCGAACGT CTCTTGACGT CGCCCATTCC TCTCTTTTAC GCTCGTCACA CGGCCCGCTT
CCTCGGAGTC TGGTTACTCC TCATGCCATT TTGCCTCTAC GACCCCTTTG CGGGTTCGTG
GAACCACGTT GGAATGATCC CAGCCACCGC CTTGATTTCC ATCTTTTTGT TCGGCATTGA
AGAACTCGCC ACGTCCATGG AAGAACCCTT TACGATTCTT CCCATGCAGG CCTTCTGC
 
Protein sequence
MLSSSRWGSA FVCFLALACS SSYRTQAFIV PSGTSSRVSV AVRSLPPPRD IAYGEESRKY 
RRTVYTHDDW VNHRSPDRFW RNIIAMPTSG VYKNLAKECI ATTAVATAIV VYNALVGGYT
DFGGVQHAAV LQNELLPKIG MPVSPFTVSG SFLGFLLIFR TNSSYKRWDE ARKNWGMNIN
HTRDLVRMGT AFYDKTGVTD EQRKKDLQAL SLATWSFVRA MKRHLSPEQE DEQDFRRELH
ERLPPRQAQA IIDAAHRPNR ALFDLSVAIE NLPMHFMRKN EIHNAATIFE DNLGSSERLL
TSPIPLFYAR HTARFLGVWL LLMPFCLYDP FAGSWNHVGM IPATALISIF LFGIEELATS
MEEPFTILPM QAFC