Gene PHATRDRAFT_26422 details

Gene Information

• Locus tag: PHATRDRAFT_26422
• Symbol: LUT1-2
• ID: 7199887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 196597
• End bp: 199249
• Gene Length: 2653 bp
• Protein Length: 769 aa
• GC content: 51%
• Product: lutein deficient 1-like protein
• Protein accession: XP_002178724
• Protein GI: 219115858

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.673064
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCACTGTCA AGGACTCCCT ATTCGCTAGT AGAATCCTCC TCCTCTACGG ATTCATAGTC 
ATCAATCCGA ACCGGTTGAG CCTGATTCGA AAACTCATAC GAAAAACTCA CAGTCAACGT 
CCGTAGCAAC GCATCGATTA CTCGCAGGGT CTTCGGAAGC GTTCTTTTAT TCGCAAGGAG 
GGCATCACTG CCAACCGCTC TTTCCAACTG TCGTTGCGGC TGTAGACTAC GCGTATTCCT 
TGGGTCGAAT TCATCCATCC ATCAATCTAT ATATTTTTTG AAAGAATGCG CTCGTCGGAT 
TACAGTCGTG CGCCTCGATG GGAGTCATTT GTAGTGCTCG CGTGGGCTAC AGCGAGTGCC 
GTCCTGGTTG GAAACGTATT CCAACAGGCA CTGCCGCAAC CAGTGCAGGC CTTTGGTCCT 
GCACTCGTCC CGCATCTTTC TCGCAGGTGC GACTTGATAC AACGACGCGT CTCGTCCGAC 
CTGGAAGACG TCGACGTCGA CGTGGACAAC GACGCAATCT TGGGCTCCAA CAACATCCCC 
CGACGACTTC GCATTCAAGG ACGGGGCATT CCGACGCGAA AAGATCCCAT CCAACCCTTG 
GATTCCATGA CGTACGAATC AGATCTGATC AAAACCTGGG AGCAGGACCC TTCCCGACAA 
AAGGGTTTCG ATTGGGAAAT TGAAAAGCTT CGGCGCTACT TTGCCGGATT GCGCATGCGG 
GACGACGGTG TCTGGGTACG CCAGCCATCC TTCTTTGACT TTCTCGTCAG CAAGTCTCGG 
AGCGATCCGG GTAATGCGCC TCGTCCCGTC GGCCTCGTGG ATGTCGTTAA ACTCGTCTTG 
ACGAATTCCT TGACGAGCGT CGGCCTGGGA CCGGCACTCG GAATGGCTGC CGTCCCCAAC 
GCCGTTATTC AAAAGTACGA AGGTTCCTTC TTTTCCTTCA TCAAAGGAGT TCTCGGTGGT 
GACCTGCAAA CCTTAGCCGG TGGTCCCCTC TTTTTACTCC TCAACAAGTA CTTTGAAGTC 
TACGGACCTA TATTTAACCT CTCCTTCGGG CCCAAGTCGT TTCTGGTCGT TTCCGATCCC 
GTCATGGCGC GTCACGTCCT GCGTGAAACG AGCCCCGACC AGTACTGCAA AGGGATGCTG 
GCGGAAATTC TGGATCCTAT CATGGGCAAA GGCCTCATTC CTGCCGATCC AGCCACCTGG 
AAAGTCCGTC GCCGGGCAAT TGTCCCTTCG TTCCACAAGC GATGGTTGAA TCGGATGATT 
ACTCTATTTG CCGAACGCGC CGAAATTCTC GCCGATGATT TACAACCCAA ATCAGCCAAG 
GGACAGGTTG TTGACATGGA AGAACGCTTT TGCAGCGTCA CACTCGATAT TATTGGCAAA 
GCCGTTTTCA ATTACGACTT TGGTTCCGTC ACGGACGAAT CGCCAATTAT CAAGGCCGTC 
TATCGCGTTT TGAGAGAGGC CGAACACCGG TCGTCGAGCT TTATTCCGTA TTGGAATCTG 
CCCTATGCGG ATCAATGGAT GGGTGGGCAG GTGGAATTCC GCAAGGATAT GACCATGCTG 
GACGACATAT TGGCCGATTT GATCAACAAG GCCGTGTCGA CACGACGAGA AGCGAGTATT 
GAAGAATTGG AAAAACGAGA AAACGAAGAT GATCCTTCCC TACTGCGATT CCTGGTCGGC 
ATGCGCGGTG AGGATTTGTC GTCCATGGTA TTGCGCGACG ATCTCATGAC CATGCTGATT 
GCTGGACACG AAACGACGGC GGCAATGCTG ACCTGGACAC TGTTCGAATT GAGTAGGGGC 
GATCCGGGCT TGTTGAAGGA AGTGCAAGCT GAAGTAAGAA CAGTCCTGAA AGGCAAAGAG 
CGACCGGATT ACGATGATAT TGTCGCCATG AAAAAGTTGC GGTATAGTTT GATCGAGGCC 
TTGCGTTTGT ATCCGGAGCC GCCGTTGCTA ATTCGGCGGG CCCGAACGGA AGACAATCTT 
CCGGCGGGCA GCTCGGATCT CAAGAGTGGC GTCAAAGTGC TGCGCGGAAC TGATATGTTT 
ATTTCCACTT GGAATTTGCA CCGTAGCCCT GATCTGTGGG AAAACCCCGA GGTATTTGAT 
CCGACCCGAT GGGACCGACC ATTTAACAAT GCTGGCATTC CTGGGTGGAG TGGATATAAT 
CCCGACAAGG TGAGCGGTTT GTATCCGAGT GAAAATGCCG CAGATTTTGC CTTTTTGCCC 
TTTGGCGGTG GTCAGCGGAA ATGTGTCGGT GATCAATTTG CCATGATGGA AGCCACGGTG 
ACAATGGCTT TGATGATTAA GAAATACGAT TTCGATTTCG CTATTCCAGC AGAAGACGTC 
GGTATGAAAA CGGGAGCCAC TATTCATACC ATGAATGGAC TCATGATGAG GGCCCGTCAG 
GTTAATGAAA ACGAGCCGGT CCAATCGGCG GAAGGCTATT GGGAAATGCA GCATTTAAAA 
CGAGGTTTGA ATGCGAATGG ACGACCGTAC ACAACCGAAG AAGAGGCGGT GTGGCAAACC 
TCGGAGCGAT TGTCACACAA AAAGGAAGAA GAAAAGCCGA ACGGCGAAGG CGGATGTCCA 
ATGCACAAGA TGTAAATGGA CGCTAGACTT TGTGTCTTGC TAAAAACCTA CAGTTAGTGA 
AAGTTAACAA ATT 

 

Protein sequence

MRSSDYSRAP RWESFVVLAW ATASAVLVGN VFQQALPQPV QAFGPALVPH LSRRCDLIQR 
RVSSDLEDVD VDVDNDAILG SNNIPRRLRI QGRGIPTRKD PIQPLDSMTY ESDLIKTWEQ 
DPSRQKGFDW EIEKLRRYFA GLRMRDDGVW VRQPSFFDFL VSKSRSDPGN APRPVGLVDV 
VKLVLTNSLT SVGLGPALGM AAVPNAVIQK YEGSFFSFIK GVLGGDLQTL AGGPLFLLLN 
KYFEVYGPIF NLSFGPKSFL VVSDPVMARH VLRETSPDQY CKGMLAEILD PIMGKGLIPA 
DPATWKVRRR AIVPSFHKRW LNRMITLFAE RAEILADDLQ PKSAKGQVVD MEERFCSVTL 
DIIGKAVFNY DFGSVTDESP IIKAVYRVLR EAEHRSSSFI PYWNLPYADQ WMGGQVEFRK 
DMTMLDDILA DLINKAVSTR REASIEELEK RENEDDPSLL RFLVGMRGED LSSMVLRDDL 
MTMLIAGHET TAAMLTWTLF ELSRGDPGLL KEVQAEVRTV LKGKERPDYD DIVAMKKLRY 
SLIEALRLYP EPPLLIRRAR TEDNLPAGSS DLKSGVKVLR GTDMFISTWN LHRSPDLWEN 
PEVFDPTRWD RPFNNAGIPG WSGYNPDKVS GLYPSENAAD FAFLPFGGGQ RKCVGDQFAM 
MEATVTMALM IKKYDFDFAI PAEDVGMKTG ATIHTMNGLM MRARQVNENE PVQSAEGYWE 
MQHLKRGLNA NGRPYTTEEE AVWQTSERLS HKKEEEKPNG EGGCPMHKM