Gene PHATRDRAFT_11441 details

Gene Information

• Locus tag: PHATRDRAFT_11441
• ID: 7199864
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 83638
• End bp: 87443
• Gene Length: 3806 bp
• Protein Length: 1212 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002178926
• Protein GI: 219116262

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.41683
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTACA ACGACGGAGG CGAAGCCTTA CCGGAAGAGG AAGGAGATGA AGTTATGGAC 
ATTGACGAAA TTCCCGTCAC GCAAGAAGAC GCCTGGGCAG TGATTAGGTA CGTGCTGGGA 
CCGAGACGAT GATGGGAGGT CGACACATTC CATACGGAAA GCACGGTAGG ATCCGGAGCA 
GCCTGCGTCC AAACGCCTTT CCTCGCGTGT CCAGAAAACG GATGATTCGT CGTTGCAACA 
TGACACTAGT TTCTCACCCA AGCACTGCCC ACAGTGCCTA CTTTGAAGAA AAAGGCTTAG 
TCCGCCAGCA ACTCGATTCT TTTGACGAGT TCATCCAAAA TACCATGCAG GAACTCGTGG 
ACGATTCCGG AGATATTCGC GTCTCGCCGG AAATTCAGCA CATGGTGGGC TACGACGACG 
AAGCCTACGA CAGAGAACAG GAAAAGGAAA CAAAGTTTGT CTTTGAGATT CACTTTGGCC 
AAGTTTACCT TTCCAAACCC ACCACGGTCG AGAAGGACGG AACCATCACC AACATGTTCC 
CACACGAAGC CCGACTCCGA AATATGACCT ATTCCGCACC GCTTTACGTT GATGTGGACT 
TGAATCAGTA TCAAGTGGGA CGAGAGGTCA ATGTTAACGA CCCCTCGGAG GATTTGGGAG 
AACCTGTCGC CACCGAACAC GCCAAGAAGG AATTTCTCGG TTACGTGCCT ATCATGTTGC 
GTTCCCTCTT TTGTGTACTT TCGGACAAGG ACGACGCCGA TTTGAGTGAC CTGGGGGAGT 
GTGTTTACGA TCAGGGTGGT TATTTCGTCA TTAATGGATC GGAAAAAGTC ATTATTGCGC 
AAGAGCGATT GTCCAACAAT CACGTTTACG CCTTTAAAAA GAAGCAGCCC AGTAAGTTTT 
CCTGGGTCAT TGAAACCCGC AGTCAAGTGG AAAACTCCAC TCGGCCTGTG TCAACCCTCT 
ACATCCAAAT GTACCACAAA GGTGGGCGCG GGGCCATTGA AGGCAATCAG ATTCGTTCCA 
CGTTGCCCTA CATTCGCACC GATATCCCCG TCGTTATCAT ATTTCGAGCA CTGGGATACG 
TAGCGGACCG GGACATTATC GAGCACGTCG TGTACGATCT GACGGATGGG GAAATGATGG 
ACTTGTTCCG ACCTTCGCTT GAAGAGGCTT TCGTCATTCA GCGACAGGAT GTGGCGTTGG 
ATTTTATCGG TCGGCGTGGA TCGGCACGGG ACGTGACCAA GGAAGACCGG ATGCGGTACG 
CACAAGCCAT TCTACAAAAG GAAGTTTTGC CGCACGTCGG AACAGAAGAG CACTGCGAAA 
CCAAAAAAGG TTTCTTTATC GGTTACGCCG TACACAAGTT ACTCATGTGT CGCTTGGGAC 
GGGCCGAAGA AGACGACCGT GATCACTTTG GTAAAAAGCG CTTGGATTTG GCCGGACCCT 
TGTTGGGCGG GCTATTTCGC GTCTTGTTCC GGAAACTGAC TAAGGATGTG CGCAAACATT 
TACAACGATG CTTGGATGAA GGCAAACACT TCAATATTGG AGCCGCTATC AAGAGCAACC 
ATATCACCGA CGGACTCAAA TACTCGTTAG CAACGGGAAA CTGGGGTGAC AAGGGAATGG 
CTACCAAAGC GGGTGTCTCA CAAGTGTTGA ATCGTCTGAC CTACGCTTCG TCGCTCTCCC 
ACCTCCGTCG ATGTAACACG CCCCTGGCCC GCACCGGAAA ACAGGCCAAG CCGCGTCAGT 
TGCATAATAC GCACTGGGGT ATGGTATGCC CAGCCGAGAC TCCCGAAGGG CAAGCCGTTG 
GTCTCGTCAA GAATCTGGCC CTCATGGCGT ACATTACGAC CGGTACCGCA CAAGTTCCCG 
TCTTGGAGTT CCTGGAAGAG TTTAGCACCG AAAACTTGAC GGACATTTTG CCCTCGGTAA 
TTGCCGAACC GAATACTTGC AAAATTTTTG TTAACGGAAA TTGGGTAGGT ATTCATCGTG 
ATCCGAAAGC ACTCGAAGAG ACATTCCGAT CATTGCGTCG AATGGTGGAC ATTGATGCCG 
AGGTTTCGAT TGTTCGAGAC ATTGCCGATA AAGAAGTTCG CATTTACACA GATGCCGGAC 
GCATCTGCCG CCCATTGTTT GTCGTTCAGG AACAAAAACT GGCAATCAAG AAGCACCACA 
TCATGCAGTT ACAGGGCATG GATCCGAATG AAAAGAAGTT GACCTGGACG GATCTTCTCA 
TGGAGGGTTT GGTCGAATAT ATTGATACAG AAGAGGAGGA GACCACCATG GTTGCCATGG 
AACCGAACGA TTTGGATTCC GACGATTCGT ATTCCTCAAC GTATACACAC TGCGAGATTC 
ACCCGTCTAT GATTCTTGGT GTATGTGCCT CGATCATCCC CTTTCCTGAT CACAACCAAT 
CTCCTCGTAA CACTTATCAG AGTGCCATGG GAAAGCAAGC TATGGGTATT TATGCGTCAA 
ACTACCAAGT ACGCATGGAC ACGATGGCGC ACGTATTGCA TTACCCGCAG AAACCATTAT 
GTACTACACG AGCGATGGAG TTTTTACATT TCCGAGAACT CCCAAGCGGT GTAAATTGCA 
TTGTCGGCAT TCTCGTTTAT ACTGGGTACA ATCAGGAAGA TTCCTTGATT TTGAATCAGT 
CAGCGATTGA CCGTGGGCTC TTCCGGTCCT CCTATTATCG CTGTTACATT GACCAGGAGA 
AAGCCAGCAC TGTCGGCACG ATTGGATCCT TGACGTCGGA ACTGTTCGAA AAACCTAGTA 
TGGACAGTAC GCGCGGAATG AAACACGGGG AGTACGGAAA ACTCGACGAT GATGGTCTGG 
TAGCTCCCGG TACTCGCGTG TCGGGAGACG ATGTTTTGAT TGGCAAGACG GCACCAATTG 
ACGCTACGGC CGGTATGCCT TCACGTTACT CCAAACGCGA TTGCAGCACG TCCATGAAGG 
CCAACGAGCA TGGCATTGTT GACAACGTGC TGATCAGTAC GACAAAAGAA GGATATCGGT 
TTACGAAGGT TCGCATTCGG AACGTCCGGA CGCCGCAGAT TGGTGACAAG TTTGCCTCAC 
GTCACGGACA AAAGGGAACG ATCGGAATGA CTTACCGTCA AGAAGACATG CCTTTCACCG 
TAGAGGGCAT CGTGCCGGAC ATTATTGTGA ATCCCCACGC TATTCCTTCT CGAATGACTA 
TCGCACAGTT AATTGAGTGT CTTTTAGGAA AGGTTGTTGT CTTTCAGGGA TGCGAAGGAG 
ATGCTACTCC TTTTACGGAC GTGACCGTCG AAGATATCAG TACCCGCTTA CACGCCATGG 
GATACCAAAG ACACGGAAAC GAAGCTTTAT ATCAGGGACA TACAGGACGC CCATTGAATG 
CTCGTGTTTT TATCGGTCCA ACCTTTTACC AGCGTTTGAA GCATTTGGTC GACGATAAGG 
TCCACTCTCG TGCTCGCGGT CCGGTTGCCA TGCTTACGCG GCAACCGTTG GAAGGTCGAT 
CTCGGGATGG TGGTTTGCGC ATGGGAGAGA TGGAACGCGA TTGCCTGATT ACGCATGGCT 
GTGCCAACTT TATGCGCGAT CGCTTCTTTG TCAATTCGGA CCAGTACCGT ATCCACATTT 
GCGAACGTTG CGGTTTGACG GCACAGGCCA ATCTCAAGAA GATGACGTAC GAATGCCGCA 
GCCCGATGTG TGTGGGTCGT CCGACGCAAA TTTGCCAGGT CGAGATCCCG TACGCGGCCA 
AGCTACTGCT ACAGGAACTC AACTCCATGT GCATTCAAAC CAGAATTTAT ACCAAGAACG 
TGACGACAAG GGATAATTCG TATTAA 

 

Protein sequence

MAYNDGGEAL PEEEGDEVMD IDEIPVTQED AWAVISAYFE EKGLVRQQLD SFDEFIQNTM 
QELVDDSGDI RVSPEIQHMV GYDDEAYDRE QEKETKFVFE IHFGQVYLSK PTTVEKDGTI 
TNMFPHEARL RNMTYSAPLY VDVDLNQYQV GREVNVNDPS EDLGEPVATE HAKKEFLGYV 
PIMLRSLFCV LSDKDDADLS DLGECVYDQG GYFVINGSEK VIIAQERLSN NHVYAFKKKQ 
PSKFSWVIET RSQVENSTRP VSTLYIQMYH KGGRGAIEGN QIRSTLPYIR TDIPVVIIFR 
ALGYVADRDI IEHVVYDLTD GEMMDLFRPS LEEAFVIQRQ DVALDFIGRR GSARDVTKED 
RMRYAQAILQ KEVLPHVGTE EHCETKKGFF IGYAVHKLLM CRLGRAEEDD RDHFGKKRLD 
LAGPLLGGLF RVLFRKLTKD VRKHLQRCLD EGKHFNIGAA IKSNHITDGL KYSLATGNWG 
DKGMATKAGV SQVLNRLTYA SSLSHLRRCN TPLARTGKQA KPRQLHNTHW GMVCPAETPE 
GQAVGLVKNL ALMAYITTGT AQVPVLEFLE EFSTENLTDI LPSVIAEPNT CKIFVNGNWV 
GIHRDPKALE ETFRSLRRMV DIDAEVSIVR DIADKEVRIY TDAGRICRPL FVVQEQKLAI 
KKHHIMQLQG MDPNEKKLTW TDLLMEGLVE YIDTEEEETT MVAMEPNDLD SDDSYSSTYT 
HCEIHPSMIL GVCASIIPFP DHNQSPRNTY QSAMGKQAMG IYASNYQVRM DTMAHVLHYP 
QKPLCTTRAM EFLHFRELPS GVNCIVGILV YTGYNQEDSL ILNQSAIDRG LFRSSYYRCY 
IDQEKASTVG TIGSLTSELF EKPSMDSTRG MKHGEYGKLD DDGLVAPGTR VSGDDVLIGK 
TAPIDATAGM PSRYSKRDCS TSMKANEHGI VDNVLISTTK EGYRFTKVRI RNVRTPQIGD 
KFASRHGQKG TIGMTYRQED MPFTVEGIVP DIIVNPHAIP SRMTIAQLIE CLLGKVVVFQ 
GCEGDATPFT DVTVEDISTR LHAMGYQRHG NEALYQGHTG RPLNARVFIG PTFYQRLKHL 
VDDKVHSRAR GPVAMLTRQP LEGRSRDGGL RMGEMERDCL ITHGCANFMR DRFFVNSDQY 
RIHICERCGL TAQANLKKMT YECRSPMCVG RPTQICQVEI PYAAKLLLQE LNSMCIQTRI 
YTKNVTTRDN SY