Gene PHATRDRAFT_11438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11438 
Symbol 
ID7199635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand+ 
Start bp805823 
End bp806566 
Gene Length744 bp 
Protein Length247 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178847 
Protein GI219116104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.178302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGTG AGAGTGGCAT TCCACGGTCT CACCTACCGC AACATATAGC GGTCGTTATG 
GACGGAAATC GACGCTACGG AACCTTGCGG TACGGAAAGG CTACATCCGG ACACTGGGAT 
GGCTCTCGCA AGGTACTGGA ATGTGCAAAG TGGTGTCTTG CCGAACATAT TCCCGTACTT 
ACGGTCTACG CCTTTTCGAC CGAAAACTGG CGCAGAGATC CACAAGAAGT AGCCACACTC 
ATGAGTTTGT TCGTCACGTA CTGCGAAGAG CTTCGGGTGG AGGCGATCCA ACGCAATATT 
AGGGTTCGTG TCGTGTCTAC CGAACACGAT CCAATCCCAC CACCAGTTCG TGCTGGATTG 
CTCCGGCTGG AGCATGACAC TCGGCACTGC GCAGCGGAAG GGACGGACGG TTTGCAGATG 
AATATTTTAC TTTCGTACGG GAGTCGTGGA GAAATAGTCC AAGCCTGTCA AGCTCTGGCA 
TCCGAGTGTC TCCACGGCAA CCTTGCCCTA CAGGATATCA GCGAGTCCCA TCTCCAACAA 
CGACTCTTGA CCAGCCACGT TCCGGATCCC GATGTCGTCA TTCGTACTTC GGGAGAATTC 
CGATTGAGCA ATTTTTTGTT GTGGCAGATC GCTTACGCAG AGCTCTTTTT CTTGGAGAAA 
AACTGGCCTG AACTACAAAA AGCGGATTTG GTGGAAATCA TTCGGTCATA CGCAGCTAAA 
AGGCAACGTC GCTATGGAAA ATAA
 
Protein sequence
MECESGIPRS HLPQHIAVVM DGNRRYGTLR YGKATSGHWD GSRKVLECAK WCLAEHIPVL 
TVYAFSTENW RRDPQEVATL MSLFVTYCEE LRVEAIQRNI RVRVVSTEHD PIPPPVRAGL 
LRLEHDTRHC AAEGTDGLQM NILLSYGSRG EIVQACQALA SECLHGNLAL QDISESHLQQ 
RLLTSHVPDP DVVIRTSGEF RLSNFLLWQI AYAELFFLEK NWPELQKADL VEIIRSYAAK 
RQRRYGK