Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11409 |
Symbol | |
ID | 7199505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 888895 |
End bp | 889374 |
Gene Length | 480 bp |
Protein Length | 160 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179084 |
Protein GI | 219116578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.562417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCCAC GGGGGCGCTA CTCCATCGAA CTGTACGACT ACTTCTTGCG ACTGCGCGGG CAAAAGTACG ACTACAAAAT CAAGTACGAC GACATTAACC GCCTCTTTCT GTTGCCCAAA CCGGACGAAG TGCACATGGC CTTTGTCATT GCCTTGGACA AGCCTATTCG GCAAGGTCAA CAGCGTTACC AGTATCTGGT GCTGCAAGCA ACCAAGGAAC CCGACGAGGT TACGGTCAAT CTCGACGAGG AGACGCTAAA GAACGAGTAC GGTGGCGAAC TTCAACCCGT CATGCGGGGC TCGCTTTCCA ACCTCGTGGC CAAAACCTTC AAAGTTATTG CCAAAAAGAA AGTCTTTATT CCGGGAAAAT TCTCTAACGC AGCCCAACAA GCCTGCGTAA AGTGCGCGGT CCGCGCGAAC GAGGGACTGC TCTATCCGCT GGAAAAACAG TTCGTCTTTA TTCACAAGCC GCCCATTCTG
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Protein sequence | LTPRGRYSIE LYDYFLRLRG QKYDYKIKYD DINRLFLLPK PDEVHMAFVI ALDKPIRQGQ QRYQYLVLQA TKEPDEVTVN LDEETLKNEY GGELQPVMRG SLSNLVAKTF KVIAKKKVFI PGKFSNAAQQ ACVKCAVRAN EGLLYPLEKQ FVFIHKPPIL
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