Gene PHATRDRAFT_11409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11409 
Symbol 
ID7199505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp888895 
End bp889374 
Gene Length480 bp 
Protein Length160 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179084 
Protein GI219116578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.562417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGCCAC GGGGGCGCTA CTCCATCGAA CTGTACGACT ACTTCTTGCG ACTGCGCGGG 
CAAAAGTACG ACTACAAAAT CAAGTACGAC GACATTAACC GCCTCTTTCT GTTGCCCAAA
CCGGACGAAG TGCACATGGC CTTTGTCATT GCCTTGGACA AGCCTATTCG GCAAGGTCAA
CAGCGTTACC AGTATCTGGT GCTGCAAGCA ACCAAGGAAC CCGACGAGGT TACGGTCAAT
CTCGACGAGG AGACGCTAAA GAACGAGTAC GGTGGCGAAC TTCAACCCGT CATGCGGGGC
TCGCTTTCCA ACCTCGTGGC CAAAACCTTC AAAGTTATTG CCAAAAAGAA AGTCTTTATT
CCGGGAAAAT TCTCTAACGC AGCCCAACAA GCCTGCGTAA AGTGCGCGGT CCGCGCGAAC
GAGGGACTGC TCTATCCGCT GGAAAAACAG TTCGTCTTTA TTCACAAGCC GCCCATTCTG
 
Protein sequence
LTPRGRYSIE LYDYFLRLRG QKYDYKIKYD DINRLFLLPK PDEVHMAFVI ALDKPIRQGQ 
QRYQYLVLQA TKEPDEVTVN LDEETLKNEY GGELQPVMRG SLSNLVAKTF KVIAKKKVFI
PGKFSNAAQQ ACVKCAVRAN EGLLYPLEKQ FVFIHKPPIL