Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11387 |
Symbol | |
ID | 7199885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 188658 |
End bp | 189704 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178946 |
Protein GI | 219116302 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTTTGT GCCTCCTCGC CATGCCCTTG GGCTGGTACT CCCACTACGC TTCTTGGGGT TCCACTTGGA TCTTTTGGCT CAACTTTTTC ACCATGATTC CGTTGGCCTC TATCCTAGGA GACTTTACGG AAGAAGTCGC CCTGCACACT AACCAGACGA TTGGGGGTCT TATCAACGCC ACCTTTGGGA ACGCCGTCGA AGTCGTCGTA GCAATCCAAG CCTTGCTCGC TAACGAAATT CGTGTCGTGC AGGCGTCCAT GATTGGCAGT ATCTTTTCCA ATCTACTCCT CGTTCTAGGC TGTTGTTTCT TTTTCGGTGG ACTCGGTCAC CAGCAGCAGC GCTTCAATTC GGTCGCCGCC ACGGCCAACA TGGGACTGCT CGCACTTTCC AGCATTGCCC TCATTCTCCC CACACCCTTT GCCGCGTACT ACGAACTCCA CGATGCACAC GTACTCACTG TTTCCCGTAT TGCCGCTTGC TTTCTCATGT GCATGTACCT CCAGTTGCTC TTTTTTCAAC TCAAGACACA CGCCAATCTC TTTGCCGGTA CTCAAGACGA CTCCGAACTG GCTGTTATGC CCTTTTGGGT TTCCATTGTG GGACTCTTGT TCACGACCCT CGTCATTACA ATCTTTTCGG ATTACTTGGT CGAGTCCATC GACGGATTCG TCACGGACAG TGGCATTTCC CGGACATTTG TAGGAATCAT TCTCCTACCC ATTGTCGGTA ACGCTGTTGA ACACGTCACG GCCGTTACGG TCGCCATGAA GGACAAGATG GATCTCGCCA TGGGGGTGGC CGTTGGTAGC TGCACGCAAA TATCTCTCTT TGTCGTTCCC CTTACCGTCC TTGTGGGATG GGCCCTCGAA CGCGACATGA CCCTCAACTT TCCGCCATTT GAAGTCATTC TCTTTGTCAT GTCCGTGTTG ACCGTGGCCA TCGTCTTGGG CAATCCCGAA TGCAACTGGT TGGAAGGGTC CCTGCTGATA ACCACCTACT TGCTCATTGC TGTCGGCTTT TGGTTCGAAG ACGTCAAGCC GTTTTAA
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Protein sequence | VSLCLLAMPL GWYSHYASWG STWIFWLNFF TMIPLASILG DFTEEVALHT NQTIGGLINA TFGNAVEVVV AIQALLANEI RVVQASMIGS IFSNLLLVLG CCFFFGGLGH QQQRFNSVAA TANMGLLALS SIALILPTPF AAYYELHDAH VLTVSRIAAC FLMCMYLQLL FFQLKTHANL FAGTQDDSEL AVMPFWVSIV GLLFTTLVIT IFSDYLVESI DGFVTDSGIS RTFVGIILLP IVGNAVEHVT AVTVAMKDKM DLAMGVAVGS CTQISLFVVP LTVLVGWALE RDMTLNFPPF EVILFVMSVL TVAIVLGNPE CNWLEGSLLI TTYLLIAVGF WFEDVKPF
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