Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11368 |
Symbol | |
ID | 7199527 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 1002963 |
End bp | 1003811 |
Gene Length | 849 bp |
Protein Length | 246 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178892 |
Protein GI | 219116194 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGG CACCAACGCT CTTGTCCAAC CTGAAATTTC ACGACCTCGT CTTTGGTCAC GACCTAGGTG TCGGCGCCTT CGGCTCTGTC CGGTACGCAA GATTGATTGA TCAAAGTACA ACAAGATCGC ATTGGGCCGA GTATGCCGTC AAAGTCATAT CCACGGAAAA AATTTGTGAG CTTGGGTACG AAGCGTCTGT ACAGCGTGAG ATTGCCGTCC TTCGCGTGCT GTCGCACCCT TGCATTGCTC GATTGGTTTC GAGTTTTCGC TTTCGTGAAG GTGCTTACTT GGTTCTGGAG TATGCCAGTG GAGGAGACCT ATTCAACTTG TTGCAAAAGC ATGGCTCGCT TGATCATGAT TCTTCCCGCT TTGTGATCGG AGAAATCGTC GCTGCCCTCG CTAGTATCCA TGAATTGGGG CTAGTGTACG CTGATTTGAA ACCAGAGAAT GTCGTTATTA CTGAAGTCGG TCACATCAAG CTGACCGACT TTGGCGGATG CCGGGCAGTT ACAGCAAAAG CAAAGGAGCT CATTCAGTCC GTTGGGAAGA ATTTGTTAAA AAAATTAAGG GATGGTGACT GGAAAGCAAA CGGAAAGAAA CCCGAAGAGG CCGACAACGA CTCGGTGGAC ACACACGCGA TATATGGTGA GACAGTAGAT ACCGACGAAG ATCTTCGAAT TGAAGGGACT ACGGCATATC TACCCCCCGA AGTAGTCATG GGTGCTTTTC CGAATTTCGC AGCCGATTCC TGGGCGTTGG GGTGTGTCCT CTACCAATGC CTGTCGGGAC GACCACCTCT GCTAGAGATG GACGAAACTG CGACCCGCCA TCGAATTGTC ACGTTTGAC
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Protein sequence | MAEAPTLLSN LKFHDLVFGH DLGVGAFGSV RYARLIDQST TRSHWAEYAV KVISTEKICE LGYEASVQRE IAVLRVLSHP CIARLVSSFR FREGAYLVLE YASGGDLFNL LQKHGSLDHD SSRFVIGEIV AALASIHELG LVYADLKPEN VVITEVGHIK LTDFGGCRAV TAKAKELIQS TVDTDEDLRI EGTTAYLPPE VVMGAFPNFA ADSWALGCVL YQCLSGRPPL LEMDETATRH RIVTFD
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