Gene PHATRDRAFT_11271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11271 
Symbol 
ID7199672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp960703 
End bp961203 
Gene Length501 bp 
Protein Length167 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178884 
Protein GI219116178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGTGTTAG AATTGAAAAT GGCGGTTTCG CGAATTCAAA TTGCGAGTAA TAAGAAAGCC 
GCCTTGTCGA AGCAAAAGAT GCGGGAAGTA GCCAAAATGC TATCCGAAGA ACCGCCCAAA
GAAGAAAAGG CGAAAATTCG TGCGGAAGCC CTCATTCGGG ACGACAATCT CATGGAAGCC
TATGAAATAC TGCAACTCGA ATGTGAATTG ATCCACGAGC GACTCAAACT TATCGAATAC
AGCCGATCAT GCCCGCCTGA TATGACTTCC GTCATTTCGA CATTAATTTG GGCATCTCAT
CGGGTGGATA TTCCCGAGCT GCTCGCCATT CGCAAACTAT TCTGTGCAAA ATACGGCAAA
GCTTTTGAAG AAGCCGCACT CGCGAATACG AATGGCGTCT TGAACGAACG GGTCGTGACA
AAATTGTCGG TAGATCCACC GGCTGCATAC CTCGTTCATA GGTATTTAGA ACGCATTTGC
GAGCAGTATG AGGTAAATTG G
 
Protein sequence
LVLELKMAVS RIQIASNKKA ALSKQKMREV AKMLSEEPPK EEKAKIRAEA LIRDDNLMEA 
YEILQLECEL IHERLKLIEY SRSCPPDMTS VISTLIWASH RVDIPELLAI RKLFCAKYGK
AFEEAALANT NGVLNERVVT KLSVDPPAAY LVHRYLERIC EQYEVNW