Gene PHATRDRAFT_11217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11217 
Symbol 
ID7199548 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp346269 
End bp347588 
Gene Length1320 bp 
Protein Length340 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178983 
Protein GI219116376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACAC CGCGTGAAAT TATGAAAGGA CTCAACGAAT ACGTAATTGG ACAAAAGAAC 
GTGAAGGTAG CCTTGTCAGT TGGGGTCTAC AATCATTACA AGCGTATTTT TGTTGTCGAG
GCACAGGCAG CGGCTGACTT GCGCAAGAGG GAAGCGGAAG AAGGATTTAT GACACCCGAC
GGACCAACTC TGGCCGACAT GAATTTGGGG CAACTTGGCA ACATTAAGGA AGAAAGGCCA
GCCACTGGTG CCTACGGCCA ACCATTTCGT GAAACTCCCG ATGTGAATAG CATCTCGGAC
AATCTGTTTG GACGGGATGT GGAAGATTGC GAAATAGACA AAAGCAATAT TTTATTGTTG
GGACCCTCCG GAAGCGGAAA GACCTTGCTC GTCAAGACAC TGGCGCGTTT GATTGACGTC
CCTTTGGTCA TTGCCGATGC AACTTGTTTG ACACAAGCTG GCTACGTCGG TGAAGATGTG
GAAAGTATCC TGTTCAAATT ATATCTTGAA AGCGGACAAG ATGTAGAACG ATGTCAGCGG
GGTATTGTTT ACATCGACGA GGCGGACAAG ATTCGCAAGT CTGGGGGAAA TGTTAGCATC
AGTCGGGACG TTTCGGGAGA AGGAGTTCAG CATGCGCTGT TGAAGATTGT AGAAGGCAAT
GTTATCAACG TCCCAAAGGT TAGTGTAGCT GGAATGCCCG GGTCTTGTAA TGGGGCGATT
GTCCCATGCT CACTTTGACC TTTTCACTTT CCACAGGAAC CCGGTCGCAA GAATCCCCGG
GGCGACTTTT TGCAGATCGA TACGACCAAT ATTCTTTTTA TCTGCGGAGG AGCATTTTCA
GGCCTCGAAC GCATTATCAA TCGTCGTATG GACGCAGCCT CTATTGGGTT CGGTGCACAA
ATGAAGAAGG CAATTGACGA TCCCAAGGTT CAAGGACGCT ACTTTGACAG CGCCATCCCC
AAAGATCTAG TAGAGTACGG GATGATTCCT GAATTTGTCG GTCGCTTTCC GGTGATTGTT
GCAACCAAGG GACTCGACAA GAAAAATCTC ATCGACATTT TGACCGTCCC AAGGAATTCG
ATTATGAAAC AGTACCGCCG TTTGTTTGCG ATGGATGATG TAAATTTCCA CGTCACCAAG
GAAGGTCTCG ATGAAATCGC GGAAACTGCT CTTGGACGTG GTACGGGAGC CCGAGGATTG
CGATCGATTA CTGATTCGGT CCTCATGGAA ACACAGTACG TTGTGCCTTC CATGCCTGAT
GTGCACACCG TGTACGTGGA TGCATCAGCC GTACGAGGGG AACGCAAACC CATATTGTTA
 
Protein sequence
MPTPREIMKG LNEYVIGQKN VKVALSVGVY NHYKHCEIDK SNILLLGPSG SGKTLLVKTL 
ARLIDVPLVI ADATCLTQAG YVGEDVESIL FKLYLESGQD VERCQRGIVY IDEADKIRKS
GGNVSISRDV SGEGVQHALL KIVEGNVINV PKEPGRKNPR GDFLQIDTTN ILFICGGAFS
GLERIINRRM DAASIGFGAQ MKKAIDDPKV QGRYFDSAIP KDLVEYGMIP EFVGRFPVIV
ATKGLDKKNL IDILTVPRNS IMKQYRRLFA MDDVNFHVTK EGLDEIAETA LGRGTGARGL
RSITDSVLME TQYVVPSMPD VHTVYVDASA VRGERKPILL