| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_11189 |
|---|
| Symbol | |
|---|
| ID | 7199557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | + |
|---|
| Start bp | 406067 |
|---|
| End bp | 408329 |
|---|
| Gene Length | 2263 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178766 |
|---|
| Protein GI | 219115942 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTGA ACCAGGTAGA GCAGGCTCAA GACATCGATT ACAAGAAGGC GTCTTCGGCC
CCACAACGCG AGGTTGATCT TGGCTTGTAC CGTAATATTG GTATCATGGC GCACATTGAT
GCCGGTAAGA CTACCACAAC GGAACGTATT TTGTTTTACA CCGGAAAATC TTATAAGATC
GGTGAAGTGC ATGAAGGCGG AGCCACTATG GACTGGATGG AGCAGGAACA AGAACGTGGC
ATTACTATTA CCTCCGCAGC CACCACTTGC TCTTGGAATG ACCACCGCAT CAACATTATC
GGTACGTCAT CTATTGCGCC TCCACATTCA TTGGTGGATG CATATTCTTC TCACAGCTTG
TTTTACGACT AAAGATACGC CTGGTCATGT TGACTTCACT TTGGAGGTCG AGCGTTCGCT
GCGTGTGCTT GACGGAGCTG TTGCGGTGTT CGACGGTGTG GCTGGTGTTG AGCCCCAAAC
AGAAACTGTG TGGCGACAGG CGGACAAATA TAAGGTCCCG CGTATGTGCT TTCTGAACAA
GATGGATCGT ACTGGTGCCA ATTTTTACTT TTGCGTGGAT ACCATTATCG ACCTTCTGGG
AGCTACCCCT GCTATCTTGC AGCTTCCCAT CGGAACCGAG TCGGACTTTC TAGGTGTTGT
CGATCTTGTC ACCATGGAAG CCGTGGTCTG GCGTGGGGAG GATCTTGGCG CCAGTTACGA
TCGTATCCCG CTTGCAGAAT GCAACGACAT TCCCTTGGTC GACGACGCCT TGAAAGCAAA
GGCCGAAGAA TACCACGAGA AGCTAGTAGA ACTTGCGGTC GAGCAGGACG AAGAAGTTCT
CATGGAATAC TTGGAAGGAA ACATGCCAGA CATCCCTACC CTGAAGAAAC TGATTCGTAA
GGGAACTCTT GCTCTTGCAT TTGTCCCTGT CGTAACTGGA ACAGCTTTCA AAAACAAAGG
TGTTCAGCCT TTGTTGGATG CTGTAGTTGA TTACATGCCT TCCCCTTTGG AGGTTGAGGC
TATACGAGGA ATCGATGAGG CTGACCAGCC TGTTGTTCGT TACTCTTCTG ATGTCGAACC
CCTTTCCGCG CTCGCTTTCA AGGTTGCCAA TGATCCTTTT GTCGGAACCT TGACCTTCAC
TCGTATTTAC TCGGGTGTAA TGGAGACGGG CACGTCCGTT TACAACTCCG TCAAGGGAAA
GAACGAACGC ATTGGGCGTA TGCTTCAGAT GCACGCCAAT GAGCGCACAG AAATCAAGTC
TGCTGTTGCG GGCGACATTG TTGCGCTAGT CGGTCTCAAG GATACTACCA CCGGAGAAAC
TCTCTGCAAG AAGGAGAAAG CGGTTATCCT CGAAAAGATG GAATTTCCGG AACCCGTCAT
CAAGGTTGCG GTCGAGCCCA AGACCAAGGC CGACCAACAA AAGATGTCCG AAGCTCTTAT
CCGCCTTGCT GCCGAAGATC CGTCTTTCCG TTTCTCTCGT GACGAAGAAA CGGGCCAGAC
TATCATTGAA GGTATGGGAG AACTTCATCT CGAAATCATT GTCGACCGTA TGAAGCGCGA
ATTTAACGTG GAGGCAAACG TTGGTGCTCC CCAGGTCTCC TACCGTGAAG CCATCACCAC
GAAGGCCGAA ATCGACTACA CACACAAGAA GCAGTCCGGA GGCTCAGGTC AGTATGCTCG
TGTCAAACTT ATCTTTGAAC CGAAGGAATT CAGTGAAGAA GAGGGATCCA TGGACTTTGA
GTTCGTTTCC GATATTAAAG GGGGAAACAT TCCCAAGGAA TATGTTCCCG GTGTGCAAAA
GGGTATTGAG TCCGTGCTCG GACAGGGTGT GATCGCGGGG TACCCAGTTT TGGGAATGAA
AGCAACCTTG ACGGATGGTG CTTACCATGA TGTAGATTCT TCTGTCATGG CTTTCGAAAT
TGCTGGGCGT GCGGCTACGC GAGAAGGTCT GCGAAAGGCC AAGGCGCGTC TCATGGAACC
TTTGATGAAG GTTGATATCA CCACCCCGGA AGATTACATG GGAGACATTC TTGGAGACAT
TAACGCTCGA CGTGGACTGG TGGGAGAGCT CGGAGAGCGA GGAAACATCA AGACTATCTC
CGCGCTCGTT CCTCTAGCTA ATATGTTCCA GTACGTTTCT ACCCTTCGTT CTATGAGTAA
GGGACGAGCA AATTACTCTA TGAAACTGGC TAACTACGAA TTTGTCCCCC CAAACGTTGA
GGAGGAGTTG AAGAAGGGCT TTACTGTCAA GGAGGACGAG TAA
|
|---|
| Protein sequence | MELNQVEQAQ DIDYKKASSA PQREVDLGLY RNIGIMAHID AGKTTTTERI LFYTGKSYKI
GEVHEGGATM DWMEQEQERG ITITSAATTC SWNDHRINII DTPGHVDFTL EVERSLRVLD
GAVAVFDGVA GVEPQTETVW RQADKYKVPR MCFLNKMDRT GANFYFCVDT IIDLLGATPA
ILQLPIGTES DFLGVVDLVT MEAVVWRGED LGASYDRIPL AECNDIPLVD DALKAKAEEY
HEKLVELAVE QDEEVLMEYL EGNMPDIPTL KKLIRKGTLA LAFVPVVTGT AFKNKGVQPL
LDAVVDYMPS PLEVEAIRGI DEADQPVVRY SSDVEPLSAL AFKVANDPFV GTLTFTRIYS
GVMETGTSVY NSVKGKNERI GRMLQMHANE RTEIKSAVAG DIVALVGLKD TTTGETLCKK
EKAVILEKME FPEPVIKVAV EPKTKADQQK MSEALIRLAA EDPSFRFSRD EETGQTIIEG
MGELHLEIIV DRMKREFNVE ANVGAPQVSY REAITTKAEI DYTHKKQSGG SGQYARVKLI
FEPKEFSEEE GSMDFEFVSD IKGGNIPKEY VPGVQKGIES VLGQGVIAGY PVLGMKATLT
DGAYHDVDSS VMAFEIAGRA ATREGLRKAK ARLMEPLMKV DITTPEDYMG DILGDINARR
GLVGELGERG NIKTISALVP LANMFQYVST LRSMSKGRAN YSMKLANYEF VPPNVEEELK
KGFTVKEDE
|
|---|
| |