Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11183 |
Symbol | |
ID | 7199879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 158808 |
End bp | 159605 |
Gene Length | 798 bp |
Protein Length | 266 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178941 |
Protein GI | 219116292 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.621413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAATTG GGACTGTCAT TCTTTCGCTT CGACTTGTGT ATCTACATCT CACGCACTGG TACATGCCCG AAGTACAAAA GTATGTCGTC CGCATTCTCT GGATGGTTCC TATTTACGCC GTGCAGTCTT ATTTGAGTCT ACGCTACCAC GAATTACGGA TTTACATTGG CTCGATCCGC GACTTCTACG AGGCTTACGT GATTGCCAGT TTCGTGTACT ACCTCATTGA ACTGCTGGGA GGCGAAGAGT CATTGATTCA TATTCTCCAA CAAAAGACTG GAACGCGGCT CGGTAAACAC AGCTTTCCTT TCAGCTTGAT TCTGCAGCCC TGGGAAATGG GCATTGAATT TATGCTGCAA TGCAAACACG GTGTACTACA GTATGTCGTC TTTAAAACCT TGTCCACTGT AACGACGTTT GCTTGCGAGT CCGCCGGAAT TTACGGGGAA GGGAAGTTCG ACTGGCGGTG TGCGTATCCT TATCTATGTT TTTTTCAAAA CATTTCAGTT ATGTATGCCT TGTATTGTCT GGTAATGTTT TACCACGCCA TCAACGAAGA GCTACGACAT CCTGTCAACT GGCATCCATT GGGCAAGTTT CTTAGTGTCA AATCGGTGGT GTTCTTTACT TGGTGGCAAG GAGTCCTCAT TTTCTATCTA CGTGCCCACG GGATCATCGA ACACATGGGA TCATGGTCGT CGGAAGATGT CGCCAACGGT CTCATTGACT ACTGCGTCAT CGTGGAAACC ATCGGTTTTG CAATTGCCCA CAGCTATACA TTTTCGTACA AGGAATAC
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Protein sequence | MVIGTVILSL RLVYLHLTHW YMPEVQKYVV RILWMVPIYA VQSYLSLRYH ELRIYIGSIR DFYEAYVIAS FVYYLIELLG GEESLIHILQ QKTGTRLGKH SFPFSLILQP WEMGIEFMLQ CKHGVLQYVV FKTLSTVTTF ACESAGIYGE GKFDWRCAYP YLCFFQNISV MYALYCLVMF YHAINEELRH PVNWHPLGKF LSVKSVVFFT WWQGVLIFYL RAHGIIEHMG SWSSEDVANG LIDYCVIVET IGFAIAHSYT FSYKEY
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