Gene PHATRDRAFT_11183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11183 
Symbol 
ID7199879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp158808 
End bp159605 
Gene Length798 bp 
Protein Length266 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178941 
Protein GI219116292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.621413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAATTG GGACTGTCAT TCTTTCGCTT CGACTTGTGT ATCTACATCT CACGCACTGG 
TACATGCCCG AAGTACAAAA GTATGTCGTC CGCATTCTCT GGATGGTTCC TATTTACGCC
GTGCAGTCTT ATTTGAGTCT ACGCTACCAC GAATTACGGA TTTACATTGG CTCGATCCGC
GACTTCTACG AGGCTTACGT GATTGCCAGT TTCGTGTACT ACCTCATTGA ACTGCTGGGA
GGCGAAGAGT CATTGATTCA TATTCTCCAA CAAAAGACTG GAACGCGGCT CGGTAAACAC
AGCTTTCCTT TCAGCTTGAT TCTGCAGCCC TGGGAAATGG GCATTGAATT TATGCTGCAA
TGCAAACACG GTGTACTACA GTATGTCGTC TTTAAAACCT TGTCCACTGT AACGACGTTT
GCTTGCGAGT CCGCCGGAAT TTACGGGGAA GGGAAGTTCG ACTGGCGGTG TGCGTATCCT
TATCTATGTT TTTTTCAAAA CATTTCAGTT ATGTATGCCT TGTATTGTCT GGTAATGTTT
TACCACGCCA TCAACGAAGA GCTACGACAT CCTGTCAACT GGCATCCATT GGGCAAGTTT
CTTAGTGTCA AATCGGTGGT GTTCTTTACT TGGTGGCAAG GAGTCCTCAT TTTCTATCTA
CGTGCCCACG GGATCATCGA ACACATGGGA TCATGGTCGT CGGAAGATGT CGCCAACGGT
CTCATTGACT ACTGCGTCAT CGTGGAAACC ATCGGTTTTG CAATTGCCCA CAGCTATACA
TTTTCGTACA AGGAATAC
 
Protein sequence
MVIGTVILSL RLVYLHLTHW YMPEVQKYVV RILWMVPIYA VQSYLSLRYH ELRIYIGSIR 
DFYEAYVIAS FVYYLIELLG GEESLIHILQ QKTGTRLGKH SFPFSLILQP WEMGIEFMLQ
CKHGVLQYVV FKTLSTVTTF ACESAGIYGE GKFDWRCAYP YLCFFQNISV MYALYCLVMF
YHAINEELRH PVNWHPLGKF LSVKSVVFFT WWQGVLIFYL RAHGIIEHMG SWSSEDVANG
LIDYCVIVET IGFAIAHSYT FSYKEY