Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11160 |
Symbol | |
ID | 7199584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 521645 |
End bp | 522943 |
Gene Length | 1299 bp |
Protein Length | 433 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178793 |
Protein GI | 219115996 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.882711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AAACTGGGTG TCATTCCTTT GGCGATTCTG GTTTTTTACA GCGTGTCCGG CGGACCCTTC GGAGTCGAGG CCGCCGTCCG GAGCGGCGGT TACTTCTACA CCCTCCTTGG CTTCTTAATC CTGCCGTGGT TTTGGTCGCT AGCCGAAGCC GCCATGACGG CCGAGCTTGG AACAGCCTTC CCGGAAGCCG CTGGAGGCGT AGCCTGGGTA GAGACCGCCT TTGGACCCGC CGCCGGTTGG ATGGCAGGGT ATTTAGGCTG GATGGCTGGA GCTACGGACA ACGCAATCTA TCCAGTTTTG TTTTTGGAAT ATCTGTTGCA AGTGTTGGGA GACGAACAGG ACGCCGTCAA TCTGCACCCC TATTGGCGTT TCGCACTGTT GAGTACAACT TCCATTTTTC TGGCCTACAT TAACTGGTTG GGCTTGCCGG TCGTCGGACA AATGTCACTT ATAATTTGTG TCATTGCGAT GAGTCCTTTT ATCATTTTGT GTGTGGTCGG CGCCTTTTCC GTCGAACCCC ATCGCTGGTG GCTCAGACCG ACCAACGAGC CGGATGTCAT AGGCGACGAT TCAACCGCCG TTGGCGGCAT TGCCTGGAGA GTCTTTCTTA ATAATTTGTT TTGGAATTTG AATTCATTCG ACGCCGCCGC CAGTTTTGCG GGCGACGTCC AAGATCCCGT GGAACGAGTG CTACCACGAG CCATGGGGTG GTCCGTTCTC CTAGTCGCGG CCGGCTACTT TCTTCCGCTA TTAGTCGCCA CGGGAGCATT GGACGATGCT GTCTTCACCT ACCGTGACTG GACGGACGGA TTCTTTGCCA AAGTTGCAAG CGAGGTGGTT GGACCTTGGT TGGGAGCATG GACAGTTTTT GCGGCGGGTG TCAGCAACAT TGCGCTTTTT CAAGCAGAAC TGAGCGCTGA TGCCTTCCAA TTGGCGGGCA TGGCGGAACG CGGTCATGTT CCCTCCTGTT TTGCTACAAG ATCCCGTCAT AACACCCCCA CCTACGGAAT CATGCTTGGG ACGCTAGTGA TTGTAATTCT CAGCGTGGCC AAGCTCGATA CCTTGATTGA AATGCTGAAT TTCAATTACG CTTTGGCGCT TTTGTTGGAG TATGCAGCCT TTGTGTCACT TCGGTTGAAT TTCCCTGACT TGAATCGTCC TTTCCGCGTT CCTTTGAACA ATACCATCTG CCTCGTTTTT CTATGTCCGA CGGTATGCTT GATTTTTGTC GTTCTAAGTT TGGCCAACCG GGAAACCTAT CTCTTCAGCT TCGTAGCCAA CCTAGTCGGT ATTGTGATC
|
Protein sequence | KLGVIPLAIL VFYSVSGGPF GVEAAVRSGG YFYTLLGFLI LPWFWSLAEA AMTAELGTAF PEAAGGVAWV ETAFGPAAGW MAGYLGWMAG ATDNAIYPVL FLEYLLQVLG DEQDAVNLHP YWRFALLSTT SIFLAYINWL GLPVVGQMSL IICVIAMSPF IILCVVGAFS VEPHRWWLRP TNEPDVIGDD STAVGGIAWR VFLNNLFWNL NSFDAAASFA GDVQDPVERV LPRAMGWSVL LVAAGYFLPL LVATGALDDA VFTYRDWTDG FFAKVASEVV GPWLGAWTVF AAGVSNIALF QAELSADAFQ LAGMAERGHV PSCFATRSRH NTPTYGIMLG TLVIVILSVA KLDTLIEMLN FNYALALLLE YAAFVSLRLN FPDLNRPFRV PLNNTICLVF LCPTVCLIFV VLSLANRETY LFSFVANLVG IVI
|
| |