Gene PHATRDRAFT_11160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11160 
Symbol 
ID7199584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp521645 
End bp522943 
Gene Length1299 bp 
Protein Length433 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178793 
Protein GI219115996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.882711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAACTGGGTG TCATTCCTTT GGCGATTCTG GTTTTTTACA GCGTGTCCGG CGGACCCTTC 
GGAGTCGAGG CCGCCGTCCG GAGCGGCGGT TACTTCTACA CCCTCCTTGG CTTCTTAATC
CTGCCGTGGT TTTGGTCGCT AGCCGAAGCC GCCATGACGG CCGAGCTTGG AACAGCCTTC
CCGGAAGCCG CTGGAGGCGT AGCCTGGGTA GAGACCGCCT TTGGACCCGC CGCCGGTTGG
ATGGCAGGGT ATTTAGGCTG GATGGCTGGA GCTACGGACA ACGCAATCTA TCCAGTTTTG
TTTTTGGAAT ATCTGTTGCA AGTGTTGGGA GACGAACAGG ACGCCGTCAA TCTGCACCCC
TATTGGCGTT TCGCACTGTT GAGTACAACT TCCATTTTTC TGGCCTACAT TAACTGGTTG
GGCTTGCCGG TCGTCGGACA AATGTCACTT ATAATTTGTG TCATTGCGAT GAGTCCTTTT
ATCATTTTGT GTGTGGTCGG CGCCTTTTCC GTCGAACCCC ATCGCTGGTG GCTCAGACCG
ACCAACGAGC CGGATGTCAT AGGCGACGAT TCAACCGCCG TTGGCGGCAT TGCCTGGAGA
GTCTTTCTTA ATAATTTGTT TTGGAATTTG AATTCATTCG ACGCCGCCGC CAGTTTTGCG
GGCGACGTCC AAGATCCCGT GGAACGAGTG CTACCACGAG CCATGGGGTG GTCCGTTCTC
CTAGTCGCGG CCGGCTACTT TCTTCCGCTA TTAGTCGCCA CGGGAGCATT GGACGATGCT
GTCTTCACCT ACCGTGACTG GACGGACGGA TTCTTTGCCA AAGTTGCAAG CGAGGTGGTT
GGACCTTGGT TGGGAGCATG GACAGTTTTT GCGGCGGGTG TCAGCAACAT TGCGCTTTTT
CAAGCAGAAC TGAGCGCTGA TGCCTTCCAA TTGGCGGGCA TGGCGGAACG CGGTCATGTT
CCCTCCTGTT TTGCTACAAG ATCCCGTCAT AACACCCCCA CCTACGGAAT CATGCTTGGG
ACGCTAGTGA TTGTAATTCT CAGCGTGGCC AAGCTCGATA CCTTGATTGA AATGCTGAAT
TTCAATTACG CTTTGGCGCT TTTGTTGGAG TATGCAGCCT TTGTGTCACT TCGGTTGAAT
TTCCCTGACT TGAATCGTCC TTTCCGCGTT CCTTTGAACA ATACCATCTG CCTCGTTTTT
CTATGTCCGA CGGTATGCTT GATTTTTGTC GTTCTAAGTT TGGCCAACCG GGAAACCTAT
CTCTTCAGCT TCGTAGCCAA CCTAGTCGGT ATTGTGATC
 
Protein sequence
KLGVIPLAIL VFYSVSGGPF GVEAAVRSGG YFYTLLGFLI LPWFWSLAEA AMTAELGTAF 
PEAAGGVAWV ETAFGPAAGW MAGYLGWMAG ATDNAIYPVL FLEYLLQVLG DEQDAVNLHP
YWRFALLSTT SIFLAYINWL GLPVVGQMSL IICVIAMSPF IILCVVGAFS VEPHRWWLRP
TNEPDVIGDD STAVGGIAWR VFLNNLFWNL NSFDAAASFA GDVQDPVERV LPRAMGWSVL
LVAAGYFLPL LVATGALDDA VFTYRDWTDG FFAKVASEVV GPWLGAWTVF AAGVSNIALF
QAELSADAFQ LAGMAERGHV PSCFATRSRH NTPTYGIMLG TLVIVILSVA KLDTLIEMLN
FNYALALLLE YAAFVSLRLN FPDLNRPFRV PLNNTICLVF LCPTVCLIFV VLSLANRETY
LFSFVANLVG IVI