| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_11128 |
|---|
| Symbol | |
|---|
| ID | 7199619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 704124 |
|---|
| End bp | 705532 |
|---|
| Gene Length | 1409 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179051 |
|---|
| Protein GI | 219116512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.40985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAAA AGCAGCTCGA AGGAGATCGT AACGTGAATC GGTGGCTAAT GCTTTTTTCC
GGTGGGCTGA TCTTCTTCAT GCAGACTGGC TTTGCGATGC TTTGCGCTGG TTGCGTGCGC
AAAAAGAACG TTCAAAATAC GATGCTTAAA AATCTTTTGG ATGCCTGTGG AGCTGCTCTA
GGCTTTTTCC TACTAGGCTA CGCTTTTGCG TTTGGCGGAC AAGACGACCG GGACGATGTT
ACTTTCATCG GAACTTCCAA CTTTCTAAAC ACCGGAAAAG TCGATATGTC CTTCTGGTTT
TTCCAGTTTG CATTCTCGGC CACTGCCGTG ACTATCGTCG CAGGAACTTT GGCAGAGCGT
TGCCAAATGG TAGCATACCT TTGCTATTCC ATATTTTTGA CAGGTTTTGT GTACCCGGTT
GCCGCCCACA CAATTTGGTC TCGCAACGGC TTCCTCAGCA GCACAGCAGT AGACCCTTTT
CAAGGTGTGG GAGCGATTGA TTTCGCCGGA TCCGGTGTGG TTCATGTGAC GGGAGGAACC
ACGGCTCTCG TCGCCACATA TATTCTTGGA GCTAGAAAAG GTCGTTTCTA CGACAATCGC
GGTCGCCAGC TGGAGACGCC AAAGTCCTTT CCGGGGCATT CAGTTGCTCT GCAGCTACTT
GGTACATTCG TATTGTGGTT TGGATGTAAG TTTGTTCAGT GGCTGAAAAA GTTCGAAAGT
GTCAGCAACC ATGTGAAGTA CTGACCAAGA CGGCTTACTA TTGTCATATA GGGTACGGCT
TCAATCCTGG ATCAGCATTG CTGCTGGCCC ACACTTCGGA TACGGGTTTC GTGGCATCCC
GAGCGGCTGT CAATACCTCG CTTTCAGCTG CTTCCGGAGC CGTATCGGCA CTGATGACAA
ATATGTTTAT GGAAGAGCGT TCCACCGGCG AATACTCCTT TAACATTATC ATGGCCATGA
ATGGCGCCTT AGCTGGTCTA GTGTCAATTA CAGCAGCTTG TGGTACCGTA CAAAACTGGG
CAGCCCTTTG CACTGGATGT ATTGGAGGTC TTATCTACTT GTGGGGTTCC AAAACGCTGG
TTCGTTTGAA ATTGGACGAT GCTGTTGACG CGATTCCAGT GCACATGTTT GCAGGTGGCT
GGGGATTGCT TGCTGTGGGT TTGTTAAGTG ATCCTGACCT CATGCACATT GCCTATGGGA
CTGGCAATCA TCCTGGTTTA TTGTATTCTT GGGGGTTAGG GGAGTTTAAC GCCATCTTGC
TGAGCAATCA AGTGTTGGAA CTAGTTTTCG TGGCGGGATG GGCTTTTGGT ACCATGACGC
CTTTCTTTTT GTTCATCAAT CGTATGGGAT GGTTCCGGTC GGACAGTTTG GAGGAGTTGG
TCGGTTTGGA TGAGGCCTAC CACGGAGGT
|
|---|
| Protein sequence | MEQKQLEGDR NVNRWLMLFS GGLIFFMQTG FAMLCAGCVR KKNVQNTMLK NLLDACGAAL
GFFLLGYAFA FGGQDDRDDV TFIGTSNFLN TGKVDMSFWF FQFAFSATAV TIVAGTLAER
CQMVAYLCYS IFLTGFVYPV AAHTIWSRNG FLSSTAVDPF QGVGAIDFAG SGVVHVTGGT
TALVATYILG ARKGRFYDNR GRQLETPKSF PGHSVALQLL GTFVLWFGWY GFNPGSALLL
AHTSDTGFVA SRAAVNTSLS AASGAVSALM TNMFMEERST GEYSFNIIMA MNGALAGLVS
ITAACGTVQN WAALCTGCIG GLIYLWGSKT LVRLKLDDAV DAIPVHMFAG GWGLLAVGLL
SDPDLMHIAY GTGNHPGLLY SWGLGEFNAI LLSNQVLELV FVAGWAFGTM TPFFLFINRM
GWFRSDSLEE LVGLDEAYHG G
|
|---|
| |