Gene PHATRDRAFT_50806 details

Gene Information

• Locus tag: PHATRDRAFT_50806
• ID: 7197801
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 903075
• End bp: 905137
• Gene Length: 2063 bp
• Protein Length: 588 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178326
• Protein GI: 219115061

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCAATTCCT GGAACAATAT TCCAATTTTC AGGAGAGAGA AAGAACTCTT GACCGCAACA 
ATGAGGGCGC AGGAGCGGAG TTTAAACTCG TATAAGTCAA ATAATTGAGA GCAGCGCGAT 
GAAGAAAATT TCTGTTATTC ACTGCTGGTC TGCTCCGCGA AGTCGATCTA CGGCGCTAAT 
GTATAGCTTC GAGGCTCGAG GATCTGACTG CGCTGCGCTG GATGAACCGC TGTACCGCGA 
ATGTCTGATT CAACGCGGCG ATGCGGTTGC CCGGCCATAC CGTAACGAAC TCATTAACGG 
CACACCTCCA TCTGGGAGCA TAACAGATCA AGTAGATGTG TGGGTGCGGG AACTTTCTAG 
CTTGGAGGAG CGCATTCGAT TGTGCGCACA GCGTTTGCCT GAAAACGGTG TCGTCTTTTG 
TAAACACATG GCGAAACATT CGTTTCTTTA CGACTTTCAG GAGGAATTTT TCGCGGATGA 
CCTGAACATT AAGCTCATTC ACAAGCATCT CTTCTTAATT CGCGATCCCG TGGCAGTCCT 
ATCGTCTTGG GGAGCGTCGG ACTCAGTGCA TGGAAGCAGC GCCACTCCTG ACGAAGTTGG 
GATTGTTCCC ATGCTCTCCA TCTTTTCGGC TCTCTGCAGC CGTCCCCACA GAATACGCTC 
TATTGTTTCG TTCCTTGATT CGGACGAACT AGTCAAAGAT CCGGAGAGAA CTCTGGGATC 
AGTTTGCGAA GACCTGGGTA TCCCGTACAA AGAATCAATG ATGTCGTGGC CAAGCGGTCC 
TCATGCTTGC GATGGTACGT TTGAGGTCGC CGGTCAAGAT TTGATAGATA AACAAAAAAC 
CATCCGGACT GCCATCTCAC TTTGTTAAAA TTTTAGGACC CTGGGCTTCC TGGTGGTATA 
GCGACGTGCA TCAATCGACA GGATGGAAAC GGAAAACACC CGACTATGGG GCTAGTCGGT 
ACCGAATTCT GAATCCCGAT TTAATGGATG CGCTAAAGGT CTCCTATCCT GCCTACGAGT 
TCTTGAGTAA ACTTACTAGG GGATATCAAA AGCGGGGTCC CTCAACCAAA ACACTGTATG 
AAGACCCAAG AAACGAGCAT TTACTGACTT ACATCGGCGC CCCAGGTCGA GGCAGAATAA 
TTCCGAGATC CATGGCTGGT GTGAGTCCGT GGGATTCATC AGTACAAGGC GGAGACGCTG 
CATGGGAAGG ACTCCGAGTA TACCGTGGAA AAGTGCTTTC GTTGGATAAA CACCTTCAGC 
GTCTTTTTAA ATCGTCGAAA GCGCTAGGTT TTGAGAACGT GCACACCAAG GCAGAAGTAG 
TGGAAGCCAT TTTCCGCACG CTGGCAGCGA ACGGTATGCG GGACGGGGCA CACATGCGTC 
TTACATTGAC ACGAGGTGAA AAGTGTACCA GCAGTATGAA TCCAAAGTTT AATGTATACG 
GAACGACGTT GATCATTCTA GCCGAATGGA AGCCCACGGA GGGTGCCACG ACCTACAACA 
ATACTTCCGG TATTGCGTTG ATTTCTGCGT CTCAACGGCG AAACTCACCT CAGACGGTGG 
ACTCCAAAAT CCACCACAAC AATTTGATCA ACAATATTCT GCCAAAGATT CAAGCAAACT 
TGGCGGGATG CGATGATGCA ATTATGCTCG ATCTCGAGGG TTTTGTATCG GAGACAAACG 
CTACCAACAT TTTCATGGTT GATAATGGAG TGCTGTTGAC GCCGCATGCT GATCATTGTC 
TGCCAGGGAT CACTCGAGCT ACCGTTTTGG AACTGGCGAA AGAAATCAAT ATACCTACCG 
AAACTCGTCG GATTTCTCTT GCCGAATTCC ACGCCGCGGA TGAGGTCTTT ACTACGGGAA 
CCATGGGCGA ACTGACTCCG GTTCGCATGA TCGACGGTCG GGTCATTGGT ATCGAAGGAA 
AGCGGGGTCC GATTACTGCC AAACTACAAA AAGTCTATCA GAGTTTGCCG GAACGTTCTG 
GTTGGGCTAC GGAGATTCCG CCTTTTGAAG CCTAAGTTTT TGGCAACGGA ATAACTACGA 
GTATAAAGGA TGAATTTATT GCG 

 

Protein sequence

MKKISVIHCW SAPRSRSTAL MYSFEARGSD CAALDEPLYR ECLIQRGDAV ARPYRNELIN 
GTPPSGSITD QVDVWRLPEN GVVFCKHMAK HSFLYDFQEE FFADDLNIKL IHKHLFLIRD 
PVAVLSSWGA SDSVHGSSAT PDEVGIVPML SIFSALCSRP HRIRSIVSFL DSDELVKDPE 
RTLGSVCEDL GIPYKESMMS WPSGPHACDG PWASWWYSDV HQSTGWKRKT PDYGASRYRI 
LNPDLMDALK VSYPAYEFLS KLTRGYQKRG PSTKTLYEDP RNEHLLTYIG APGRGRIIPR 
SMAGVSPWDS SVQGGDAAWE GLRVYRGKVL SLDKHLQRLF KSSKALGFEN VHTKAEVVEA 
IFRTLAANGM RDGAHMRLTL TRGEKCTSSM NPKFNVYGTT LIILAEWKPT EGATTYNNTS 
GIALISASQR RNSPQTVDSK IHHNNLINNI LPKIQANLAG CDDAIMLDLE GFVSETNATN 
IFMVDNGVLL TPHADHCLPG ITRATVLELA KEINIPTETR RISLAEFHAA DEVFTTGTMG 
ELTPVRMIDG RVIGIEGKRG PITAKLQKVY QSLPERSGWA TEIPPFEA