Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44695 |
Symbol | |
ID | 7197899 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 1303309 |
End bp | 1307383 |
Gene Length | 4075 bp |
Protein Length | 1096 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178402 |
Protein GI | 219115213 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.874089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAGGACACCA CACCCCTTTC TCATGAAGTT TCCTTCGCAA CTCGGAGCCA CGGTCGCTTT CGTCGTCGTT GCCACAACGA CAACTAAAAC GGTGTCGGGC AATCTAGCCT CTCCGTTCCC TTTCGAAGAA ACCAACGCTG ATGGAACCCC CACAGGTGAG ATGTACATCC ACGGAGGACC TGGCGAAAGC TGGTTCGAAG ACAAGCAGGG ATTCACTATT TGTCCAGTGG ATGAGCAGCC AACTAGACGT AGTCGACGTT TTCTTGGTGT CTTGGACTGG TTCACTGGTG GGACAAGCGA GGAAGATTTA GCCTCTTCTG ATCCAGAAAG GACCTTCTAC TACTGCGACC AGGACGAGAA CGGCAACGCG GTACCCAGAA CGGATCTGAA AGTGGGTGAG AGCGATCCCC AAGCCTCTGG CCTCCCCGCA CATATTGAAA TAACGAGCGA TCAGCTCGAA GCGCAATGTG GGCCTTACTG TCAGTTGGAC GAAAACGGTC GCCGCTTGGG TGAAGAAGAG ATCGATGGCA GCCATCGCAA GCTCCAGGGA ACTTTGAAGA ACCTCGTGGT CCTTATGCGG TTCAGCGATC ACGCTACTCG GGATCTTCCG TCGGTGGGTG AAGTGGACGA CCTGATGAGT GCCGATAGTC CCACCACGTC CTGTCCTACT GGTAGTGTAA AGCAGGTGTT CTTGGAGAAC AGCAATGGTC GATTGATTCT CGATTCCACC GTCTACCAAT GGGTGACCCT CGACCCTTTA TACACGGAGA CATACTGTGC CAATGGACGA TCCGGTCTTG ACGCACGCGT CCACGAATGC ATTGCGAACG CACTGGACCA GGTTGAAGCT GGTGGATTGG ACTTCCGTGA CTTTGATCAG GACAGCGACG GCAGAATCGA TGCCATTACC TTTCTGCACT CGGGCTATGG GGCAGAATGT AAGTTTCGAA AATAGAAAAT ACGGCAGTCG CATGAGATGA TAGTGCTCTC CTATAAATAT CTGACAATCT CTTCTTCTGA ACCCTTAGGG AATGGAGCTC CTAATCGCAT CTGGTCGCAC AAGTGGGTGC TATACTCCAT CAACGACGGT GGCGGGAGTG GCTGGACGTC TAACACGGGT GTGAGCGTGT ACACCTACCA CATCAGCCCG TCTCTGTGGG GCACTAGTGG CAACGCAATT GGTCGCATCG GAGTCATTGG TACGTGGCGT AAAGGCACCA CACAAGGAGA ACTGGCGCTC TGTGGTAGTC GCGCTTCGAC TTTTGCTCCG AGTAACTTCC TGTTGGGACG AACTCACACA TTTCTCAATC ACTCTGTCCT TGCAGCTCAT GAAACCGGCC ATTTTCTGGG ACTACCTGAT CTCTACGACA CCGATGGAGG CGGACAAGGG CTAAACTCCT GGAGTCTGAT GGCCAACAGT TGGGGATTTG ACGGGTCGCA GCTGTACCCG CCTCTCATGG ATCCTTGGTG TAAAATCCAG CTAGGTTGGG TCACTCCCAC AGTCTTGACG GAAACCTCTC GAAGTATCGA GATTAAACCT TCTTATACCG AGGACGACTA CTATGTCATC CAAAAGGGTT TCCCACAGGG AGAGTATCTC GTGATTGAGA ATCGTCGCAG GGTGGGATAC GACAGCCAGA TTCCCAGGGT AGGTTTTTGT TTTGTTTTCC AATGGGCCAT AATGCTGACT GTTGAGTCGA CGTGAATTCT TACCTGTTAT CCTGTCATGC CTTGCCTTGC TCTTTGACTG TGAATGTCGT TTGATTGTAG GAGGGACTTA TGATCTACCA CATTGATGAC AGTGCTAGTT TCAATCGAGA GGGCTTCCCA GGCCAATTTA ATTGGCCTCA AAACGGAAAC CACTACAGAG TAGCGCTCTT GCAAGCTGAC GGGGCCTACA ATTTGGAACG AGGACGCGGT GGAGATAGTG GTGATGTGTT CCACGGCGGG AGCGGCGGCG TTTCGTCCCT TGGCCCTGGT CCGAATGTCT ATCCAAACAC TGATAGTTAC AAATTTGGTA ACATTGTTCA AACTCGAGTC ACCATTGAGA ATATAAGTCC GGCCGGCGAG ATGATGACTT TTGATTTCCT GGACGGCGAC GATGTGGTAG AGGGCGCTCC GACCCAAGCA CCCACAACAG AAGGCCCGCA CGAAATTAGT GTTAGAGTGA CGCACGATAG ATATCCCGAA GAAACGTCCT GGAACCTAGT AAACGTGGCT GGAGGAGGCG TACTTGCTCG TCAGAATGCA GGCGAAGTCA CAACCGACAA TACGGTTGTT GTAGAGACAA TTCGAGTTTA CCCCGGCACC TTTCGGTTCG ACATATCGGA TGTGTACAAC GATGGCATTT GCTGCACCTA TGGAATAGGG TCTTTCGAGA TCAAGGTTGA TGGTATGGTT GTTTATGCTT CTGACGGGGC GTTTGGTCAG TCCGATAGTA CCACGTTCGA AGTCGGTGGC GCCATCATCG ATACGTCCGC ACCCATGGGA CAATCCAGTC CTGCGCCCAC GCCGATTCCG ACTGTACAAC CCACAGGGCC GCCCACTGTT TTTCCTACAG TTTCGCCTAG CACGAGTCCC ACCTTCCCTG CTCCAACAGC TCCACCAACT GTGACGCCAA CGGATAGGCC TACCACTCTT GCTCCGACAA ACGCTCCAAC CAGTCAGCCT TCGAACACAC CGACAACCAT ACCAACCTCC CTTCCAACCG TTTCTTTCAG TACAGCTTCA CCCACTCGGG CGCCAACCGA TACGCCTATC ACACTTTCTC CTACATTGAC TCCGACCAGT CCGCCCTCAA ACACCTCCAC TTCTGTAACC ACCTTCAGCC CAACCAGCCT AATCTCCACA GCTTCACCTA CTGCGATACC ATCCAATAGA CTTGCTACTC AATCTCCAAC AGTAGCTCCC ACCAAGCAGC CATCTGCTTA CCCGTCTGCA GCACCCACTG TTACAGCAAC AAACTTACCC ACTGGAGAAG AGTCAAACCT TGACAACAAT TATCTGATTG AAATTGAAGT AGTCCATGAT GATTATCCGT GGGAAACTTC ATGGACCTTG ACAAAGCCAG ACGGTGTCAA CGAAGTTCTC GCATCTCAAG CGCAGGGTTC CATTGTCACG AAGGGCTACG TAACAAACAT TGCGCTTAAC CTTTCTTCTG GAGCGTACTT GTTTGAGTTG AGGGATTCTG CCAGTGACGG AATTTGCTGT GGGTGGGGAA TTGGCGGTTA CGAAGTCAAG GTGGATGGCA CTGTCGTTGC CACCGGGGGC GAGTATGGGC CCTCAAAGCT TGAAACCATC ATAGTCGGCC CCGTGGATCC TCCGTCCGAC GACTTGGTGG AAGTGACAGT TCGAGTGAAG CACGACAATT ACCCCGGGGA AACGGGCTGG GAGATGCTGG ACACAACAAC CAACGCCGTA TTGATAAATC AGGTTCAAGG TACTGTTACC AGTCGCGGGC AGGTTGTGAC GAAGAGTGTC CTAGTTTCTC CGGGAGAGTA TGCGTTCCAC ATAACGGATA CGTTCAGCGA CGGTGTTTGC TGCTCGTATG GTGAAGGTCT ATACGAAGTA CTTGTTGGTA ACACTGTTGT TGCCAGCGGT GGCGATTTTG GAGCCGAGAG CTTCAACACT TTCGTAGTCG TAGGCCTCTA GATAGACAGC ATTGCATCCT GCCGGTTAGT CTGGCTCTTA ATTTGTTGTC AAATGAATCA ACTATTAAGG ATTGATATAC ATTGAAGGTG TGAAGTATTG GAATTACGTG TGCAATATGG GAGCCATGGA AGAAGGCCAA GGGCCAAAGT AGGTTATGGA TGAGACAGAT GACACGCTGC TAGGTACATT GGTCAAATAT AAAGCTGCTT CAGACCTGAG GAGAATAAAA ATTTGCTTTC AATTTCTTGG AATATGCTGT TCTGAGAACA GAAAGCAATT TTGTTACAAG TCATCGAGGG TCAACTTGCT TAAAGTTTCG TCGTGTATGG CTTTTCTGCT GGCCATCCAG GCTGTCAATG TCAAGGCATC GTCTTTTTCA GCAATGAATG AATCTTCTAA TTCCGCAAGG TTTCCAACAA TAGTG
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Protein sequence | MKFPSQLGAT VAFVVVATTT TKTVSGNLAS PFPFEETNAD GTPTGEMYIH GGPGESWFED KQGFTICPVD EQPTRRSRRF LGVLDWFTGG TSEEDLASSD PERTFYYCDQ DENGNAVPRT DLKVGESDPQ ASGLPAHIEI TSDQLEAQCG PYCQLDENGR RLGEEEIDGS HRKLQGTLKN LVVLMRFSDH ATRDLPSVGE VDDLMSADSP TTSCPTGSVK QVFLENSNGR LILDSTVYQW VTLDPLYTET YCANGRSGLD ARVHECIANA LDQVEAGGLD FRDFDQDSDG RIDAITFLHS GYGAEWNGAP NRIWSHKWVL YSINDGGGSG WTSNTGVSVY TYHISPSLWG TSGNAIGRIG VIAHETGHFL GLPDLYDTDG GGQGLNSWSL MANSWGFDGS QLYPPLMDPW CKIQLGWVTP TVLTETSRSI EIKPSYTEDD YYVIQKGFPQ GEYLVIENRR RVGYDSQIPR EGLMIYHIDD SASFNREGFP GQFNWPQNGN HYRVALLQAD GAYNLERGRG GDSGDVFHGG SGGVSSLGPG PNVYPNTDSY KFGNIVQTRV TIENISPAGE MMTFDFLDGD DVVEGAPTQA PTTEGPHEIS VRVTHDRYPE ETSWNLVNVA GGGVLARQNA GEVTTDNTVV VETIRVYPGT FRFDISDVYN DGICCTYGIG SFEIKVDGMV VYASDGAFGQ SDSTTFEVGG AIIDTSAPMG QSSPAPTPIP TVQPTGPPTV FPTVSPSTSP TFPAPTAPPT VTPTDRPTTL APTNAPTSQP SNTPTTIPTS LPTVSFSTAS PTRAPTDTPI TLSPTLTPTS PPSNTSTSVT TFSPTSLIST ASPTAIPSNR LATQSPTVAP TKQPSAYPSA APTVTATNLP TGEESNLDNN YLIEIEVVHD DYPWETSWTL TKPDGVNEVL ASQAQGSIVT KGYVTNIALN LSSGAYLFEL RDSASDGICC GWGIGGYEVK VDGTVVATGG EYGPSKLETI IVGPVDPPSD DLVEVTVRVK HDNYPGETGW EMLDTTTNAV LINQVQGTVT SRGQVVTKSV LVSPGEYAFH ITDTFSDGVC CSYGEGLYEV LVGNTVVASG GDFGAESFNT FVVVGL
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