Gene PHATRDRAFT_44695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44695 
Symbol 
ID7197899 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1303309 
End bp1307383 
Gene Length4075 bp 
Protein Length1096 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178402 
Protein GI219115213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.874089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGGACACCA CACCCCTTTC TCATGAAGTT TCCTTCGCAA CTCGGAGCCA CGGTCGCTTT 
CGTCGTCGTT GCCACAACGA CAACTAAAAC GGTGTCGGGC AATCTAGCCT CTCCGTTCCC
TTTCGAAGAA ACCAACGCTG ATGGAACCCC CACAGGTGAG ATGTACATCC ACGGAGGACC
TGGCGAAAGC TGGTTCGAAG ACAAGCAGGG ATTCACTATT TGTCCAGTGG ATGAGCAGCC
AACTAGACGT AGTCGACGTT TTCTTGGTGT CTTGGACTGG TTCACTGGTG GGACAAGCGA
GGAAGATTTA GCCTCTTCTG ATCCAGAAAG GACCTTCTAC TACTGCGACC AGGACGAGAA
CGGCAACGCG GTACCCAGAA CGGATCTGAA AGTGGGTGAG AGCGATCCCC AAGCCTCTGG
CCTCCCCGCA CATATTGAAA TAACGAGCGA TCAGCTCGAA GCGCAATGTG GGCCTTACTG
TCAGTTGGAC GAAAACGGTC GCCGCTTGGG TGAAGAAGAG ATCGATGGCA GCCATCGCAA
GCTCCAGGGA ACTTTGAAGA ACCTCGTGGT CCTTATGCGG TTCAGCGATC ACGCTACTCG
GGATCTTCCG TCGGTGGGTG AAGTGGACGA CCTGATGAGT GCCGATAGTC CCACCACGTC
CTGTCCTACT GGTAGTGTAA AGCAGGTGTT CTTGGAGAAC AGCAATGGTC GATTGATTCT
CGATTCCACC GTCTACCAAT GGGTGACCCT CGACCCTTTA TACACGGAGA CATACTGTGC
CAATGGACGA TCCGGTCTTG ACGCACGCGT CCACGAATGC ATTGCGAACG CACTGGACCA
GGTTGAAGCT GGTGGATTGG ACTTCCGTGA CTTTGATCAG GACAGCGACG GCAGAATCGA
TGCCATTACC TTTCTGCACT CGGGCTATGG GGCAGAATGT AAGTTTCGAA AATAGAAAAT
ACGGCAGTCG CATGAGATGA TAGTGCTCTC CTATAAATAT CTGACAATCT CTTCTTCTGA
ACCCTTAGGG AATGGAGCTC CTAATCGCAT CTGGTCGCAC AAGTGGGTGC TATACTCCAT
CAACGACGGT GGCGGGAGTG GCTGGACGTC TAACACGGGT GTGAGCGTGT ACACCTACCA
CATCAGCCCG TCTCTGTGGG GCACTAGTGG CAACGCAATT GGTCGCATCG GAGTCATTGG
TACGTGGCGT AAAGGCACCA CACAAGGAGA ACTGGCGCTC TGTGGTAGTC GCGCTTCGAC
TTTTGCTCCG AGTAACTTCC TGTTGGGACG AACTCACACA TTTCTCAATC ACTCTGTCCT
TGCAGCTCAT GAAACCGGCC ATTTTCTGGG ACTACCTGAT CTCTACGACA CCGATGGAGG
CGGACAAGGG CTAAACTCCT GGAGTCTGAT GGCCAACAGT TGGGGATTTG ACGGGTCGCA
GCTGTACCCG CCTCTCATGG ATCCTTGGTG TAAAATCCAG CTAGGTTGGG TCACTCCCAC
AGTCTTGACG GAAACCTCTC GAAGTATCGA GATTAAACCT TCTTATACCG AGGACGACTA
CTATGTCATC CAAAAGGGTT TCCCACAGGG AGAGTATCTC GTGATTGAGA ATCGTCGCAG
GGTGGGATAC GACAGCCAGA TTCCCAGGGT AGGTTTTTGT TTTGTTTTCC AATGGGCCAT
AATGCTGACT GTTGAGTCGA CGTGAATTCT TACCTGTTAT CCTGTCATGC CTTGCCTTGC
TCTTTGACTG TGAATGTCGT TTGATTGTAG GAGGGACTTA TGATCTACCA CATTGATGAC
AGTGCTAGTT TCAATCGAGA GGGCTTCCCA GGCCAATTTA ATTGGCCTCA AAACGGAAAC
CACTACAGAG TAGCGCTCTT GCAAGCTGAC GGGGCCTACA ATTTGGAACG AGGACGCGGT
GGAGATAGTG GTGATGTGTT CCACGGCGGG AGCGGCGGCG TTTCGTCCCT TGGCCCTGGT
CCGAATGTCT ATCCAAACAC TGATAGTTAC AAATTTGGTA ACATTGTTCA AACTCGAGTC
ACCATTGAGA ATATAAGTCC GGCCGGCGAG ATGATGACTT TTGATTTCCT GGACGGCGAC
GATGTGGTAG AGGGCGCTCC GACCCAAGCA CCCACAACAG AAGGCCCGCA CGAAATTAGT
GTTAGAGTGA CGCACGATAG ATATCCCGAA GAAACGTCCT GGAACCTAGT AAACGTGGCT
GGAGGAGGCG TACTTGCTCG TCAGAATGCA GGCGAAGTCA CAACCGACAA TACGGTTGTT
GTAGAGACAA TTCGAGTTTA CCCCGGCACC TTTCGGTTCG ACATATCGGA TGTGTACAAC
GATGGCATTT GCTGCACCTA TGGAATAGGG TCTTTCGAGA TCAAGGTTGA TGGTATGGTT
GTTTATGCTT CTGACGGGGC GTTTGGTCAG TCCGATAGTA CCACGTTCGA AGTCGGTGGC
GCCATCATCG ATACGTCCGC ACCCATGGGA CAATCCAGTC CTGCGCCCAC GCCGATTCCG
ACTGTACAAC CCACAGGGCC GCCCACTGTT TTTCCTACAG TTTCGCCTAG CACGAGTCCC
ACCTTCCCTG CTCCAACAGC TCCACCAACT GTGACGCCAA CGGATAGGCC TACCACTCTT
GCTCCGACAA ACGCTCCAAC CAGTCAGCCT TCGAACACAC CGACAACCAT ACCAACCTCC
CTTCCAACCG TTTCTTTCAG TACAGCTTCA CCCACTCGGG CGCCAACCGA TACGCCTATC
ACACTTTCTC CTACATTGAC TCCGACCAGT CCGCCCTCAA ACACCTCCAC TTCTGTAACC
ACCTTCAGCC CAACCAGCCT AATCTCCACA GCTTCACCTA CTGCGATACC ATCCAATAGA
CTTGCTACTC AATCTCCAAC AGTAGCTCCC ACCAAGCAGC CATCTGCTTA CCCGTCTGCA
GCACCCACTG TTACAGCAAC AAACTTACCC ACTGGAGAAG AGTCAAACCT TGACAACAAT
TATCTGATTG AAATTGAAGT AGTCCATGAT GATTATCCGT GGGAAACTTC ATGGACCTTG
ACAAAGCCAG ACGGTGTCAA CGAAGTTCTC GCATCTCAAG CGCAGGGTTC CATTGTCACG
AAGGGCTACG TAACAAACAT TGCGCTTAAC CTTTCTTCTG GAGCGTACTT GTTTGAGTTG
AGGGATTCTG CCAGTGACGG AATTTGCTGT GGGTGGGGAA TTGGCGGTTA CGAAGTCAAG
GTGGATGGCA CTGTCGTTGC CACCGGGGGC GAGTATGGGC CCTCAAAGCT TGAAACCATC
ATAGTCGGCC CCGTGGATCC TCCGTCCGAC GACTTGGTGG AAGTGACAGT TCGAGTGAAG
CACGACAATT ACCCCGGGGA AACGGGCTGG GAGATGCTGG ACACAACAAC CAACGCCGTA
TTGATAAATC AGGTTCAAGG TACTGTTACC AGTCGCGGGC AGGTTGTGAC GAAGAGTGTC
CTAGTTTCTC CGGGAGAGTA TGCGTTCCAC ATAACGGATA CGTTCAGCGA CGGTGTTTGC
TGCTCGTATG GTGAAGGTCT ATACGAAGTA CTTGTTGGTA ACACTGTTGT TGCCAGCGGT
GGCGATTTTG GAGCCGAGAG CTTCAACACT TTCGTAGTCG TAGGCCTCTA GATAGACAGC
ATTGCATCCT GCCGGTTAGT CTGGCTCTTA ATTTGTTGTC AAATGAATCA ACTATTAAGG
ATTGATATAC ATTGAAGGTG TGAAGTATTG GAATTACGTG TGCAATATGG GAGCCATGGA
AGAAGGCCAA GGGCCAAAGT AGGTTATGGA TGAGACAGAT GACACGCTGC TAGGTACATT
GGTCAAATAT AAAGCTGCTT CAGACCTGAG GAGAATAAAA ATTTGCTTTC AATTTCTTGG
AATATGCTGT TCTGAGAACA GAAAGCAATT TTGTTACAAG TCATCGAGGG TCAACTTGCT
TAAAGTTTCG TCGTGTATGG CTTTTCTGCT GGCCATCCAG GCTGTCAATG TCAAGGCATC
GTCTTTTTCA GCAATGAATG AATCTTCTAA TTCCGCAAGG TTTCCAACAA TAGTG
 
Protein sequence
MKFPSQLGAT VAFVVVATTT TKTVSGNLAS PFPFEETNAD GTPTGEMYIH GGPGESWFED 
KQGFTICPVD EQPTRRSRRF LGVLDWFTGG TSEEDLASSD PERTFYYCDQ DENGNAVPRT
DLKVGESDPQ ASGLPAHIEI TSDQLEAQCG PYCQLDENGR RLGEEEIDGS HRKLQGTLKN
LVVLMRFSDH ATRDLPSVGE VDDLMSADSP TTSCPTGSVK QVFLENSNGR LILDSTVYQW
VTLDPLYTET YCANGRSGLD ARVHECIANA LDQVEAGGLD FRDFDQDSDG RIDAITFLHS
GYGAEWNGAP NRIWSHKWVL YSINDGGGSG WTSNTGVSVY TYHISPSLWG TSGNAIGRIG
VIAHETGHFL GLPDLYDTDG GGQGLNSWSL MANSWGFDGS QLYPPLMDPW CKIQLGWVTP
TVLTETSRSI EIKPSYTEDD YYVIQKGFPQ GEYLVIENRR RVGYDSQIPR EGLMIYHIDD
SASFNREGFP GQFNWPQNGN HYRVALLQAD GAYNLERGRG GDSGDVFHGG SGGVSSLGPG
PNVYPNTDSY KFGNIVQTRV TIENISPAGE MMTFDFLDGD DVVEGAPTQA PTTEGPHEIS
VRVTHDRYPE ETSWNLVNVA GGGVLARQNA GEVTTDNTVV VETIRVYPGT FRFDISDVYN
DGICCTYGIG SFEIKVDGMV VYASDGAFGQ SDSTTFEVGG AIIDTSAPMG QSSPAPTPIP
TVQPTGPPTV FPTVSPSTSP TFPAPTAPPT VTPTDRPTTL APTNAPTSQP SNTPTTIPTS
LPTVSFSTAS PTRAPTDTPI TLSPTLTPTS PPSNTSTSVT TFSPTSLIST ASPTAIPSNR
LATQSPTVAP TKQPSAYPSA APTVTATNLP TGEESNLDNN YLIEIEVVHD DYPWETSWTL
TKPDGVNEVL ASQAQGSIVT KGYVTNIALN LSSGAYLFEL RDSASDGICC GWGIGGYEVK
VDGTVVATGG EYGPSKLETI IVGPVDPPSD DLVEVTVRVK HDNYPGETGW EMLDTTTNAV
LINQVQGTVT SRGQVVTKSV LVSPGEYAFH ITDTFSDGVC CSYGEGLYEV LVGNTVVASG
GDFGAESFNT FVVVGL