Gene PHATRDRAFT_44522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44522 
Symbol 
ID7197782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp798784 
End bp800012 
Gene Length1229 bp 
Protein Length352 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178307 
Protein GI219115023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.431246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACAATTCG TGTAGCAGAC TTATTCTTGG AAGCCCGGAG AACAAAATCC ATGCTCGATT 
CTGCGATACC TACTTTTCTT TGTGAAATAT TCCGCTCATG AAGTTCTGCA TGTACGAGTT
CATGTAAGGC AATTGACTGA CCGTGAACAA CCAAAAGATA TCAAGTCGCC ATGCTCCCTT
TACAACGCAA GAAGGTTGCC ATGGCATTTC CAAAATGGCC AACTGTCACG CTAAATCTGT
GGACCCTTCT TGTTTCGTCA AGCCTTCTTT GCTTTGTTGT CTACCAACTG GCCGTACAAA
AATTCAAAGT TGAACTGTAC GAGATGGGCC GCCAGCAGCG TATTCATGAG CTTATTCAGC
AAAGCGCACC AATAGATGCG TCTGTGATCG AAGAGTTGTA TCAAGCTATT TCATCAGAGA
GGTTGGCTCG GATTGCAAAC AAGTTCAAGG AAGTATATTC ACTCAATGAT CCGTTTCCAC
ATATAACAAT CGACGGAATT TTTCCCAAGC GATTTTTGGA GGAAGTTTTA AAAGAAAACC
ACGAATCTGT TGGTGCGAAT GGATGCCTCG CAGGTGCTGG GAAGTGTTTT CAAGAGAGAG
TCCAGAAAAA GAAATCAGCT ATTGAAGAAG ACGATCTGAT GGGACTACAC ACCAAGATTC
TATTTTCTGC GATGAAAAGC TCAAACTTCA TTCATTTTCT GGAAATGCTA ACGGGCATTC
AAGATATCAT ACCCGATCCG CATTACCGTG GTAGTGGCAT ACATTTGACA GCTACCGGCG
GGAACCTCAA CGTCCACGCT GACTTCAACA AGTATGAGGC CTACCAGCTG GACCGGCGAG
TTAATTCTTT TGTATTTCTA AATCAAGACT GGCCTGAGTC CTACGGTGGG CATTTGGAGT
TCTGGACAAA AGATATGGGT TCCTGTGTCC AGCGCATTCT TCCAGTCTTT GGGCGCTTCG
TTGTCTTTTC GTCCACCGAT TTTTCGTACC ATGGTCATCC CCAGCCTTTA TCTACACCGG
AAGGTCGGGC TCGCAGATCC TTAGCTTTGT ACTACTATAC AAATGGAAGA CCTGCGAATG
AATGTCTGAA AGGCGACTGT AGTGGTAGAG GGCATTCTAC GTTGTTCCAA AGACCGGTTG
GCTGCAAGAT ATGTGAGGAA CAGACTTGCA AGGCGTACAG AGACAATGAA AAACTTCCGT
ACTGGGAAGA TTCGGAGGCG AACACATGA
 
Protein sequence
MLPLQRKKVA MAFPKWPTVT LNLWTLLVSS SLLCFVVYQL AVQKFKVELY EMGRQQRIHE 
LIQQSAPIDA SVIEELYQAI SSERLARIAN KFKEVYSLND PFPHITIDGI FPKRFLEEVL
KENHESVGAN GCLAGAGKCF QERVQKKKSA IEEDDLMGLH TKILFSAMKS SNFIHFLEML
TGIQDIIPDP HYRGSGIHLT ATGGNLNVHA DFNKYEAYQL DRRVNSFVFL NQDWPESYGG
HLEFWTKDMG SCVQRILPVF GRFVVFSSTD FSYHGHPQPL STPEGRARRS LALYYYTNGR
PANECLKGDC SGRGHSTLFQ RPVGCKICEE QTCKAYRDNE KLPYWEDSEA NT