Gene PHATRDRAFT_44486 details

Gene Information

• Locus tag: PHATRDRAFT_44486
• ID: 7197762
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 708686
• End bp: 711746
• Gene Length: 3061 bp
• Protein Length: 834 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178286
• Protein GI: 219114981

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.330794
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTTCCTCTTC AACCAACGAA CGGTCTTGGT CGCGAGCGAT ATCGAAACAC AGTGAGAGAA 
AAGGGATCCA ACTGAAGACG AGAGGAAACT CATCCACCCG TTCAACACAA GTTATCTTTC 
TTTTGAAAAA GGAGTAACTC TTAGTATTCT CCCCCGCACT CGTGTTTCAA GGATGATGAT 
TTCTCGTATT TCGGTCGTGG CGCTGTTCAA CCTTCTGGTA GCGACATACC ATACGGAGGC 
TTTTGTACCG TCGCATCACC AGCGTCGAGC AGTCATTCGA ACAACAGCAG GCACATATCC 
TTCCGCTTAC TCCCGCCTCT ACTTTTTTGG ACGCAACAAG GACGACGACG AGGCGTCGGA 
AGCCGATAAT ACGGACAAAA AAAGTCCATT CTTCGCACGT TTTGGTATCG GAAAGAACGA 
GAACGAAGAC GACTCTGAAG ATAAAGCATC GGAACAAAAT TCTAAAGTGC ACGAGACTGT 
TGCAGCGGTG GCTACCGTAG CCAAAGATGA GGTCGAAAAG GAGCAAGGGT TCACTAGTGG 
ACCTCTTCCT CGCACATCGC GGGCGCCCAA GCGAGTGGTC GATGCAAACT TGTCGCCCCT 
CGAGCAGGCG GCCGCGTTGC AAGCGCAAGC CAAGAAAATC CGTCTCGAAG CTGAAAAGCA 
AGACGCGGAA CTTACTTTGG CGAAAATCAC AAAGTTGGAA AAAGAAATTG CACACGCCAA 
GAGGCACAAG GAGTCGCATG ATGACGCCGT GGTGGAATTA TTGCAAAGGG AACTGCAGGC 
TTTGGAAGCC AAAATGAGGG GAGAAGCGCC AGCACCAGTG ATACGGTCTA AGCCATTGTC 
TAATAAAAGC GAAAGCGGCG CGGTCCCTGG CACGACAGAT ATCGCCGCAA AAGTGGCAAC 
CCGAGCAATG CCTGAGAACG GCTTTTCAGC CACCGTGAGC ATGGCCGAGG ACCCTGCTGA 
AGCACTACAA TCGCTCGACG AACTTACCAA ATTTATAGAA AATTCACCCA AATTTATGAA 
GAAAGCACTC GCGGCACAGG TCGAGCTAGA TTATGCCGAC GTGGAAAACC TTAACACGAC 
TGAAATGGCG CTTCGCGTCG ACAAAATGCG TCGTCTCGAC TTTTCCTTCT CGGCGCGTCC 
TAAACCCAGA TTTACCTTTG AGGAAGTCAA TGCGAAGAAG AAGGAACTCA GCAAGGGATG 
GGCTAAATCT CTGTTGGATC CCCGTCTCAC GTCGGCGGCT AGTGGCAACG AAACAGAGCT 
TGCCTTGCTC GCTCTGGAAT ACGAGTATTA CAACAAGGGA GGCATGGTGC TTTCGCAGGA 
TCAACTAAGT GAAATGTCCC AGGACGACGA GTTTATCGCG CAAATAGTTT CTGCGGTCAA 
CAAGTCAGCT GTGGATAGTT CGATTGAAAC ACTTTTTCCG AAGTGTACCC GTAAAGAAGG 
ACAGGCTCCC ACCATGGCAC AAGTCCAGCG ACTAATTACC GATGTTTTGC CAAAAGCAAA 
GTTTTCGTCA ACGTCTAAAC CAGAACCTGT TGCCGGTGGC TTTGTCATTC GGGGAATTAA 
CAAGGCAGAA AACGGCGACG AGCTGATCGA AGCAATTGAC AAGCAGCTTA CTAAGTACCC 
AAATTTGGCC GACAAACTAT CCGTCTTGTA CACCAACGAC TTTACTGTCT TTGCCAGTAC 
CGAGGTTGAA AGCGACGAAT TCAACTTCGA CGATGTTGAG CCCATCCTAT ACGTGACTGG 
TCCGAATATC GTTCGAGAAC CCCGGAGGGT GCTCTTGTCG TTGACGTCTG CTTTAGGAAT 
CGCTTCATCT TGGTATCTAT CCCTTTACCC GTTCCTTCTA AATCCAGCGT TGTCTAAACG 
GGTCGACGAG CAGTTGGCTT TGGCCGACGC CAATATGACA CCGGATCTGA CGTGGTTGAC 
GGATCTGTCG CTTCCCTTGT TTACGACGTT CGTCTCGATC CAGTTAATCC ACGAAATCGC 
CCACCGGGCT GTCGCTGCCT TTTATGATGT GAGTGGCGTG CTTTGTGGAA GGAAGCGATA 
AGATCGTAGG AGTTCGGCTC ACACTTTCTT ATTCCTGTCC CACAGATCAA AGTTTCTGCT 
CCAACGTGGG TACCTTCCAT CTTTACTGGT ATAACGAGCA GTGTAACCAC GTTCCGGACC 
TTACCAAAGA ATAAGCAAGC GATGTTTGAC TTCTCGGTAG CCGGACCGCT GGCAGGAATG 
ATTGCTTCTG CCATCGCGAT TTTTATCGGG TCACAGATCA CTGCAAACCA GGATGCTTCA 
TTGTATCCTG CTCTTCCTTT GGAGATCTTA CGACAGAGTA CTCTGGGTGG TGGAATTATT 
GAAAGCATGC TAGGTAGTGG AGCACTGAGT GTTCCTGGTG GTGCTCTCGG GACCCAGGCC 
GTTGCTCAGA TGATGATTCC TTTGCATCCA GTGGCCGTTG CCGGCTATAT TAGTCTTGTT 
CTGAATGCCC TTGCGATGCT ACCCGTTGGA AGTAAGTAAT GAGCGAGGAT TCCGGTTTCA 
TGCGTCAAAT TTTGACTTAC GAATCCATTT GTTTATATTT GGCTAACTTG CAGCCACCGA 
CGGGGGTCGT ATTGCCTTAT CAGTTTTTGG ACGTGGCGCC AAGCTTCTTG TCGGAAACGC 
GTTTCTGTTT GCAATGCTTG CAATTGGCCT TTTAGGATCT GATCTTTTCC TGTTCTATTT 
CGCTTTCTGT ATTGCGTTTC AACCCGGCAA CGAAATACCG TCACGGAACG AGGTTGATCG 
TGTTGACTTT TCTCGTGTTG TGGTTGCCAC TAGTGCATAT ATAGTTGCTA TATTGGCGCT 
AATACCTTTC CAGTGAGGGC TTCATCTCAT GTTTTTTCAC AGTCAGTATC TGCTATTTGT 
CAACCATCAC CGGTATTTTA CTAGGACCCG CCTAGTCGAA TGCAGCAGCA TTTAAATTAC 
TCCTCAAGCG CTCAATCCCA TTCTAGAACT TGCAGGAACA CTGCCCTGCC TCACCATTGA 
ACTGTTGTAG ATGCCGTCCT ACTAGAAATT TAATGCAATA GGAATGGATT TAAAAATACT 
A 

 

Protein sequence

MMISRISVVA LFNLLVATYH TEAFVPSHHQ RRAVIRTTAG TYPSAYSRLY FFGRNKDDDE 
ASEADNTDKK SPFFARFGIG KNENEDDSED KASEQNSKVH ETVAAVATVA KDEVEKEQGF 
TSGPLPRTSR APKRVVDANL SPLEQAAALQ AQAKKIRLEA EKQDAELTLA KITKLEKEIA 
HAKRHKESHD DAVVELLQRE LQALEAKMRG EAPAPVIRSK PLSNKSESGA VPGTTDIAAK 
VATRAMPENG FSATVSMAED PAEALQSLDE LTKFIENSPK FMKKALAAQV ELDYADVENL 
NTTEMALRVD KMRRLDFSFS ARPKPRFTFE EVNAKKKELS KGWAKSLLDP RLTSAASGNE 
TELALLALEY EYYNKGGMVL SQDQLSEMSQ DDEFIAQIVS AVNKSAVDSS IETLFPKCTR 
KEGQAPTMAQ VQRLITDVLP KAKFSSTSKP EPVAGGFVIR GINKAENGDE LIEAIDKQLT 
KYPNLADKLS VLYTNDFTVF ASTEVESDEF NFDDVEPILY VTGPNIVREP RRVLLSLTSA 
LGIASSWYLS LYPFLLNPAL SKRVDEQLAL ADANMTPDLT WLTDLSLPLF TTFVSIQLIH 
EIAHRAVAAF YDIKVSAPTW VPSIFTGITS SVTTFRTLPK NKQAMFDFSV AGPLAGMIAS 
AIAIFIGSQI TANQDASLYP ALPLEILRQS TLGGGIIESM LGSGALSVPG GALGTQAVAQ 
MMIPLHPVAV AGYISLVLNA LAMLPVGTTD GGRIALSVFG RGAKLLVGNA FLFAMLAIGL 
LGSDLFLFYF AFCIAFQPGN EIPSRNEVDR VDFSRVVVAT SAYIVAILAL IPFQ