Gene PHATRDRAFT_44482 details

Gene Information

• Locus tag: PHATRDRAFT_44482
• ID: 7197713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 700014
• End bp: 702003
• Gene Length: 1990 bp
• Protein Length: 600 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002178557
• Protein GI: 219115523

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00564143
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGGGTCGGA GAAAAACGCG TAACAGTTAA TCTGAAAGGC CAAATACTGT GCAATCCTAT 
ATAGTACACA GTCGAATAAG ATCGGCGATA ATCTATGCCC GTTGACGCAA GGAAAGCACC 
TCAAGTTCAG TTTCTGCAGA TTTAGATCAA CGGAATACCA TGTTATCAAA AAAAGTTCTG 
TCTAGTTTCC AGAAATCTTC GGTCGGAGCT TGTGTACTCT CGGGGACAAG GCGTGTATCT 
ACCGCACATG TCCGTTGCGT CTCGGTGGCT GCATTGAGCC ATTTCGCTGG CAACGATAAT 
GCTTCACTGT CAAGTAAATG CTCGTTAATG AATGTTGCTG CTGCTGCCGC TGCTGCGACC 
GCCACGATTC TAACCTGGGC CGGTGCCACT TCGCTTTGTG ACTCCAATGC AAAGCCCATG 
AGTACCGAAG ATTCACATTT GACTCCTTCA GAAGTCGGCA AGGAAGACTT TGAGGAGTTC 
CAGGCATCCC ACGATATCAA TAGCATGCCT GTCTACTCAC TGGAAGAGAT AGCCGAAAAG 
AATGGAGAAA ACGGAAACCC CATCTGGATG TCGTACGGTG GTGTCGTTTA CGATGTTACT 
GATTTCATCC CTAACCATCC CGGCGGATCG GAAAAGATTC TCACTGCAGC CGGGTCGGCA 
ATTGAGCCCT TCTGGTATCT CTATCGTCAA CACTTTGCCT CAGATCTCCC AATGCGTCTA 
ATGGAGCATA TGGCGATTGG ACGTCTGTCA GAGGAAGATC AAGAAAGGAT AGAAGAACAG 
ATGGCGACAT TGGAAGAAAC GGACCCATAC GCCAAAGAGC CATACCGACA CCGAGCTCTG 
CTGGTGCACT CAGATACACC CATGAACGCA GAATGTCCCA CGCGCTTCTT GACACAAAAC 
TTTCTGACGC CTGCTTCTAT TTTTTATATC CGCCATCACC ACCCGGTCCC GTTTTTGTCT 
GAGAAGCAGG TGAATGACTT TCGGCTGAAG GTCGATTTGA CAGCTTATGG GAAAGGCGTC 
GTGCTATATA GCGTGGATGA ACTAAGAAAA ATGAAAAAAG TGGAAATCAC TGCCACACTG 
CAGTGCAGCG GAAATCGCCG CAGTGGATTC AATCAGTTCC AGAGAACTTC TGGCACGCCA 
TGGGGCCAAG GAGCTATATC TACAGCCAAG TTCGGTGGAG TTCGCTTGAC AGACTTATTA 
AAGGCGTCCG GCCTGAAGGA TCCCATTGAG GCCGAAGAAA AGTTGGGCCT TGAGCACGTG 
CGCTTCCACA GTTTAGATGG TATGTCGGCA TCAATAGGAA TGGAGAAGGC AATGAATCCT 
TACGGCGATT GTATCGTTGC TTACGAAATG AACGACGAAC CGATCCCTAG AGACCACGGT 
TTTCCACTCC GAATTATTGT TCCCGGCTAT GCTGCGGTTC GGAATGTCAA GTGGTTAGAA 
AAAATTGAGC TAGCCAAAAC TGAAGCAGAA GGCCCTTGGC AACGTGGGCT CAACTACAAG 
ACACTCCCTC CAAACATGAC AAATGCAAAG AACGTTGACC TAAACAAAAT GCCCTCAATG 
ACGGAAGTAA GTTTATTTTC TGGTATTACA CAAGTCGAAA AGCCAGAAAT GAAAGAAGGC 
ATGAAGGCTG GTGATAAAAT CACTGTGAAG GCAACCGGTT GGGCGTGGGC AGGAGGAGGT 
CGCAACATTG TTCGTGTGGA CGTAACTGGA GACAACGGTG CATCCTGGGC AACCGCAATT 
CTAAAAGAAG GATCCGAGCA GCGCTTTGGT CGCGCTTGGG CATGGACATT TTGGGAATGC 
GACGTTCCGG CGATCGTACA AGAAGATGGC AATGTGCATT TAGCATCTAA AGCGGTCGAC 
CTGGCGTTTA ACGCGCAGCC AGAAGACGCG AATCATACAT GGAATGTCAG AGGACTCGGC 
AATAATAGTT GGTACCGCAC CAAGATCAGA ATATTGGAAT AAATGTTAAA AAGCGTCGCC 
ATTTATATTG 

 

Protein sequence

MLSKKVLSSF QKSSVGACVL SGTRRVSTAH VRCVSVAALS HFAGNDNASL SSKCSLMNVA 
AAAAAATATI LTWAGATSLC DSNAKPMSTE DSHLTPSEVG KEDFEEFQAS HDINSMPVYS 
LEEIAEKNGE NGNPIWMSYG GVVYDVTDFI PNHPGGSEKI LTAAGSAIEP FWYLYRQHFA 
SDLPMRLMEH MAIGRLSEED QERIEEQMAT LEETDPYAKE PYRHRALLVH SDTPMNAECP 
TRFLTQNFLT PASIFYIRHH HPVPFLSEKQ VNDFRLKVDL TAYGKGVVLY SVDELRKMKK 
VEITATLQCS GNRRSGFNQF QRTSGTPWGQ GAISTAKFGG VRLTDLLKAS GLKDPIEAEE 
KLGLEHVRFH SLDGMSASIG MEKAMNPYGD CIVAYEMNDE PIPRDHGFPL RIIVPGYAAV 
RNVKWLEKIE LAKTEAEGPW QRGLNYKTLP PNMTNAKNVD LNKMPSMTEV SLFSGITQVE 
KPEMKEGMKA GDKITVKATG WAWAGGGRNI VRVDVTGDNG ASWATAILKE GSEQRFGRAW 
AWTFWECDVP AIVQEDGNVH LASKAVDLAF NAQPEDANHT WNVRGLGNNS WYRTKIRILE