| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_26346 |
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| Symbol | |
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| ID | 7197892 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 1259957 |
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| End bp | 1262239 |
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| Gene Length | 2283 bp |
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| Protein Length | 647 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178673 |
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| Protein GI | 219115755 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.607128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAAACAACAA ACAACAGCAC CCATTCCAAC CAACACTGGT AGTCTTCCGT TGCAAATCAA
GGTTGCTTGC TTGGAACTGT ATCGATATCA GTGCTATACA AATACTCTCG CTATCCTCCT
CACTCATTAC TCACTAATTA CTCACGATAT CGAGGGATGA GTGCCGACGA GTCGTTACCG
GCGACGGGGA CCAGTGGATG TCCCCAACCG CCGTGGGAAA AACCCACGCC TGCGGAAGTC
ACGCACGATC CGCGACTCTG GATTACCAAC TCCTTGACCC GACAAAAGGA ACACTTTCTC
ACCATGGACG GATCCTCCCG CATGGTATGG TACATGTACG TAATGCAATG CCTCGGTGTC
ATTATTATTA TTATTATTGT TTTATTGAGG ACGTTGTTGT TGCTGCCAAG GGAACACACA
CACACACACA CAAATCGTAC TCACAGTCAA CGCCATACCT ATGTCACTCA CACTACCAAA
ACATTCACAC ACACACACGC AAAAAGGTGC GGACCCACCG TATACGCTCC TTCGCACATG
GGACACGCCC GGACCTATCT CGGTTTCGAC ATTATCCGAC GCATTCTCGA ACGGCACTTT
GGCTACCACG TTACTCTCGT CATGAACGTG ACCGACATTG ATGACAAGAT CATTGAGCGG
GCGGCCGAAC AGCACGTGGG TCACCTCCAA CTGGCGCGTC GCTACGAAGC CGAATTCCAT
CAGGACATGG CCGATCTAGG TGTCGCACCG CCCACCACAC TCACCCGCGT CACCGAATAC
ATGGACGAAG TCACCGCATA CATTGCCAAC ATTATACAAC GCGGATTCGC CTACGAATCA
AACGGCAGCG TCTATTTTGA CGTACAGACA TTCTCCGACA CCCCCCACAT GCACTACTGT
AAACTCGCCC CCGAGCAAGT CGGCAACGCC GAACTATTGG CCGAAGGCGA AGGTAAACTC
ACGCAAGACT TTGTCACGGA CAAACAGAGT CCCCGCGATT TTGCACTCTG GAAAAAGACC
AAACCCGGGG AACCCTCCTG GGATTCACCA TGGGGACCCG GACGACCCGG ATGGCACATT
GAATGCTCCG TCATGGCCAG TGACGTCCTG GATAGACTCC TCCAACACCG ACGCATGGAC
CTGCATTCCG GCGGCGTCGA TCTCAAATTT CCACACCACG ACAACGAAAT GGCACAGGCC
GAGGCCGAAT GCGGCGAAAC ACAGTGGGTC AACTACTTTG TACACGCCGG GCACTTGCAC
ATTAAAGGAC TCAAAATGTC CAAATCACTC AAGAACTTTA TCACCATCCA ACAAGCGCTC
GAAATTAACT CGGCACGGCA AATACGCATG CTTTTTCTTC TCCACAAATA CAACGCGCAG
ATGGATTACG GCGACAACAC CATGACCCAC GCCATGGAAA CGGAAAAACG TTTCGTCGAA
TTCTTCCACA ACGTCAAAGC GTGTTTGCGG CAACACCGCA TGGATGATTC GCAAAAATGG
GATGCCACCA CCATTCGGCT CCAACAGACA CTAGCCGCGG CGAAAACCAA AGTCCACGAC
GCTCTGCGGG ACGACTTTGA TACACCAACC GCCATGTCGG TCCTCGTCGA TCTCGTGCGG
GCAACCAACA TATACGTGGA GGGCGATACC GTCGTTAATT TGGTCGTCCG TAACGTGGCC
TCCTATGTGA CGGACATTTT TCGAACGTTT GGACTCGTGG GCAGCGAGGA TGTGGGATTT
GCCACGGAAT CCGGTGGCGC AAGTCGAGAG GAAACGCTCG GCCCTGTCCT GGACGCTCTC
ATGAACTTTC GGGCGGCGGT CCGAGACAAG GCGCGTTCAC AAGACGTTGG AGGAGTACTC
GACCTCTGCG ACGCCTTTCG CGATCTGCAC CTACCCAACC TCGGGATTCG TCTCGAAGAC
AAGGCCGATG GGTCGGTTTG GAAACTGGCT GATCCGGCGG AACTCTTGCG AGAAATGGAA
CAAAAAGAAG CGGAGGCGAC GCGACGCGCG GAAGAAAAGG CGCTCAAAGC TTCCGAAGAT
GCGCAAAAGG AAGCCCTCAA TCGGCTACCC CCGGTCGAGT ACATGCGGCA ATTGACGCTG
GAAGACAATG TCACGCTCAT GTACTCCCAA TTTGACGAGG ATGGGATTCC CACCCACGAC
GCGACCGGAG AGCCTGTGAA CAAGAATCAA GGAAAGAAGG TGCAAAAACT GTTCAAGGCA
CAACAGGGCA AGTACGATAA GTGGATCAAG TCGCAATCCA ACGACGCATA GAGAGAATTG
TTG
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| Protein sequence | MSADESLPAT GTSGCPQPPW EKPTPAEVTH DPRLWITNSL TRQKEHFLTM DGSSRMVWYM
CGPTVYAPSH MGHARTYLGF DIIRRILERH FGYHVTLVMN VTDIDDKIIE RAAEQHVGHL
QLARRYEAEF HQDMADLGVA PPTTLTRVTE YMDEVTAYIA NIIQRGFAYE SNGSVYFDVQ
TFSDTPHMHY CKLAPEQVGN AELLAEGEGK LTQDFVTDKQ SPRDFALWKK TKPGEPSWDS
PWGPGRPGWH IECSVMASDV LDRLLQHRRM DLHSGGVDLK FPHHDNEMAQ AEAECGETQW
VNYFVHAGHL HIKGLKMSKS LKNFITIQQA LEINSARQIR MLFLLHKYNA QMDYGDNTMT
HAMETEKRFV EFFHNVKACL RQHRMDDSQK WDATTIRLQQ TLAAAKTKVH DALRDDFDTP
TAMSVLVDLV RATNIYVEGD TVVNLVVRNV ASYVTDIFRT FGLVGSEDVG FATESGGASR
EETLGPVLDA LMNFRAAVRD KARSQDVGGV LDLCDAFRDL HLPNLGIRLE DKADGSVWKL
ADPAELLREM EQKEAEATRR AEEKALKASE DAQKEALNRL PPVEYMRQLT LEDNVTLMYS
QFDEDGIPTH DATGEPVNKN QGKKVQKLFK AQQGKYDKWI KSQSNDA
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