Gene PHATRDRAFT_11088 details

Gene Information

• Locus tag: PHATRDRAFT_11088
• ID: 7197725
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 756420
• End bp: 759840
• Gene Length: 3421 bp
• Protein Length: 1086 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002178570
• Protein GI: 219115549

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAATCG AAACAGAGTC TGGTGCCGTA TCGGGAACTC GAGGAACTGC CAAACGTGAT 
ACGTTGCGAG CGAACGAAGT CGCTGTGCAA AAGATTTGGG ACGAAGAGAA GGTGTTTGAA 
ACGGAACCCG ACGATCGTGA AAGTTTCATG GTGACTTTTC CATACCCTTA TTCGAATGGT 
CATTTGCACA TTGGACATGC ATTTTCCTTG ACGAAGGCAA TTTTCCGAGC TCAATTCGAG 
CGCCACCGAG GCAAGAATGT GCTGTTTCCA TTTGCCTTTC ATTGCACAGG CATGCCAATT 
CAAGCGGTAC GTTGATGAAA TCCAATCCTT TTCCTTTGCA GATTCAAAAT TCTGACAAGT 
TTCCGCGGTT TACCAAAACT AGGCAGCGAA TAAGCTAACA TCGGAGATTG AATTGTATGG 
ATGCCCTCCT CAGTTTCCGG AAGCCGATCC TGAAGTCCGT GCCAAGATGG AAGCAGAAAT 
TGCCGCCTCG AAAGAAGCCA AGGCGGCCCA ACCTGAAAAT AAGTCAAAAG GGAGCAAGAC 
AAAGCTTGTG CAAAAGACCG GAACGGGAAT TGTGCGACAG TGGAACATTC TCCTCAAAAT 
GGTTCCGGAA GATGAGATTC CGGCATTCCA GGATCCTTTG CATTGGCTGA GCTACTTTCC 
TCCAATTGGT GTAGACCACT TACACAACTT TGGAGCAGGC GTGGATTGGC GGCGGGCGTT 
TATAACTACG TATGTCAATC CATACTATGA TGCATTCATT CGTTGGCAGT TCGAGGTATT 
GAAAGAGAAA GGCAAGATCC TTTTTGGGAA ACGTAACAAT GTGTTCTCGC TGGTTGACGG 
ACAAGTTTGT GCAGATCACG ATCGTTCGGA AGGTGAAGGT GTAGGACCTC AGGAATATGT 
CCTGATTAAG CTTAAAGTGC TGCAGCCAGG CCACGGACAG TCCCGCCATG CGAAGATGGA 
AGCAATTTTG GCGAAATATG ACCAGCCTGT ATATTTTGTC CCTGCTACCC TGCGCCCTGA 
AACTATGTAC GGACAAACCA ACTGCTTTGT CCTCCCTGAC GGTGAATACG GTGCCTATAT 
GATTGATGCA ACGAACGAAA TTTTTATCAT GAGTGCGAGA TCGGCTCGGG GACTCTCATG 
CCAATCATAC CAGGGAAATG AATACTTTAC CAAAGAGTTT GGTAAAATCC TGTGTCTCGA 
AACGTTTACA GGTAGCGAAT TGCTGGGCTT GCCGTTAAAA GCTCCGATGG CGAAGTACGA 
TAAGATTTAT ACCCTTCCAT TGTTGACGAT AAGCATGGGC AAAGGAACTG GAGTGGTGAC 
ATCCGTCCCT AGTGACGCTC CCGATGACTT TGTTTCACTT AAAGCGCTAC AGGACAAACC 
CGACTTTCGC GCGAAATACG GCATTACGGA CGACATGGTC ATGCCGTACG AAGTTGTTCC 
AATCATCACA ATAGAAGGAT ACGGCGATGC GTCTGCTGTC TTTATGTGTG AAAAGCTAAA 
GATTACAAGC TTCAACGATA AGGCTAAGCT TCAGCAAGCC AAGGATGAGA CATACCTTAA 
GGGTTTTAAT ATGGGAATTA TGAAAGTCGG AAGCCATTCC GGAAAGAAGG TCAGCGATGC 
CAAACCAATT ATCAAGCAGG AATTGATTCT TGCTGGCCAG GCGTGTCTGT ACTTTGAACC 
AGAATCTAGG GTGGTTTCCC GAACGAGTGA CGAGTGTGTT GTCGCTTCTA CAGATCAGTG 
GTATCTGGCA TATGGAGAGG AGTCGTGGAC TAAAGCTGTT AAAAAGCACG TCTTGAACTC 
GGATAATTTC AACGCATATG ACCCGGCTGC TTTGCACAAG TATGACTACA CCATTGGCTG 
GTTGCAAGAA TGGGCGTGTA CTCGGCAGTT CGGTCTGGGA ACATTCTTGC CATGGGATAG 
AGCCTGGGTT ATTGAGAGTT TGTCGGACAG CACTATCTAC ATGTCCTTTT ATACTATCGC 
ACATTTTCTC CAGGGAGAAG GCAATTTGAC AGGTGACAAA TCAAAGTCTC CTTGCAGCAT 
TGATCCTGCA GATTTGTCAA ATGACGTATT TGATTTCATT TTTCGCAAAG GACCATTGCC 
AAGTGACTCA AATATCCCGG CCAAGACATT AGAGAAGATG CGTACCGAGT TCCGTTATTG 
GTACCCGATG AATTTACGTG TGAGCGCGAA AGACTTGATT CAGAACCATT TGACTATGGC 
GCTTTTCAAT CATGCCGCTG TTTGGGAGGA GGAACCAGAG CTATGGCCCA AAGGATACTA 
CTGCAATGGG CATGTCCTTG TGGATGCCGA GAAGATGTCA AAGTCGAAGG GGAACTTCTT 
GATGATGAAT GATACAATAC AAACGTATGG TGCGGATGCC ACCCGGTTTG CCTGTGCCGA 
CGCTGGCGAC TCGTTAGATG ATGCGAACTT CAGCCGAGAG ACAGCCGACG CCGCCATTCT 
ATCTCTTATC ACGGAAGATG CATGGATAAG TGAAACGCTC ACATCTGTGG ACCTTCGATC 
CGGCGAAGAA AATCTGATCG ATAAAATTCT GTTGAACGAA ACAAACCGCC TAATTGCTAG 
TGCTGGTAGT AATTTTGCTC GAATGCAATT CAAGGAAGGA CTTAAGGAAG GATGGTTTGA 
GATGCTCAAC GCCCGCAATG ACTATCGAGC CTGGTGCAAG GATAGCGGTG TTCCAATGCA 
CAAAGGTGTA GTTCTACGGT GGGCAGAGAC CATTGTAATT TTGATTTGCC CGATTTGTCC 
GCATTGGTAT GTATCTCGTT GAAAACGAGA ATTACGATCG CTTCATTGAA TTTGCATCGT 
CTTACTCACC TTCTGTTGGT GTATCTACAG GTCCGAGAGG ATATGGAAAC AGATCGGAAA 
CATCGGGTTG GCCATTCGGG CACCATGGCC GGTGGCGGAG GAAGAAGACA AAATTTTGAC 
TCGACAAGCC AAGTTTTTGA GAGATTCTAT AAAGCACTTC CGTTCCCAGG CTGGGAGAGC 
AAAGAAGGGG TGGATGAGGG CTTCTATTCT TGTAAACGAT AGCTATCCTC AGTGGAAGAT 
TGATACGCTT GTATGGATGC AAGGCCAGTA CGATGTATCG TCTGGATTTT CTCCAGGATT 
CATGAAAGAC CTAAAGGATT ATACTGCAAA GTTTGTGAAA GACAAGAAAT TGATCAAGTT 
TACAATGCAG TTCGCCTCAT TCATGAAGAA AGAAACAGAG GATGTAGGTG ACGCCGCGCT 
CGACGTTCTG CTTCCCTTTG ACCAGAAAGA GATACTTCAG GTAAGTATTG AATACATTAA 
GGCGCAGCTC AACATCGAAG AACTTGATAT TATCCAGCTG GGTGTGGAGG AAGCACCTGA 
AGTCCCAGAA AGAGTCCGGG AGAACGTAAC GCCAGGAAAG CCGTCTCTTT ATATCCGCTA 
A 

 

Protein sequence

MTIETESGAV SGTRGTAKRD TLRANEVAVQ KIWDEEKVFE TEPDDRESFM VTFPYPYSNG 
HLHIGHAFSL TKAIFRAQFE RHRGKNVLFP FAFHCTGMPI QAAANKLTSE IELYGCPPQF 
PEADPEVRAK MEAEIAASKE AKAAQPENKS KGSKTKLVQK TGTGIVRQWN ILLKMVPEDE 
IPAFQDPLHW LSYFPPIGVD HLHNFGAGVD WRRAFITTYV NPYYDAFIRW QFEVLKEKGK 
ILFGKRNNVF SLVDGQVCAD HDRSEGEGVG PQEYVLIKLK VLQPGHGQSR HAKMEAILAK 
YDQPVYFVPA TLRPETMYGQ TNCFVLPDGE YGAYMIDATN EIFIMSARSA RGLSCQSYQG 
NEYFTKEFGK ILCLETFTGS ELLGLPLKAP MAKYDKIYTL PLLTISMGKG TGVVTSVPSD 
APDDFVSLKA LQDKPDFRAK YGITDDMVMP YEVVPIITIE GYGDASAVFM CEKLKITSFN 
DKAKLQQAKD ETYLKGFNMG IMKVGSHSGK KVSDAKPIIK QELILAGQAC LYFEPESRVV 
SRTSDECVVA STDQWYLAYG EESWTKAVKK HVLNSDNFNA YDPAALHKYD YTIGWLQEWA 
CTRQFGLGTF LPWDRAWVIE SLSDSTIYMS FYTIAHFLQG EGNLTGDKSK SPCSIDPADL 
SNDVFDFIFR KGPLPSDSNI PAKTLEKMRT EFRYWYPMNL RVSAKDLIQN HLTMALFNHA 
AVWEEEPELW PKGYYCNGHV LVDAEKMSKS KGNFLMMNDT IQTYGADATR FACADAGDSL 
DDANFSRETA DAAILSLITE DAWISETLTS VDLRSGEENL IDKILLNETN RLIASAGSNF 
ARMQFKEGLK EGWFEMLNAR NDYRAWCKDS GVPMHKGVVL RWAETIVILI CPICPHWSER 
IWKQIGNIGL AIRAPWPVAE EEDKILTRQA KFLRDSIKHF RSQAGRAKKG WMRASILVND 
SYPQWKIDTL VWMQGQYDVS SGFSPGFMKD LKDYTAKFVK DKKLIKFTMQ FASFMKKETE 
DVGDAALDVL LPFDQKEILQ VSIEYIKAQL NIEELDIIQL GVEEAPEVPE RVRENVTPGK 
PSLYIR