Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11084 |
Symbol | |
ID | 7198071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 850939 |
End bp | 851775 |
Gene Length | 837 bp |
Protein Length | 279 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178588 |
Protein GI | 219115585 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.558869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAAGTCCATG CATGCCAGTT CTCAAGCTGG TACGCCACCT TTGCCAACCT CCCACCGAAC GAGCTCGGCC GCAAGAACGT GACAGTCCCG TCAGAGATTC TAAATCTACC CGAAACTTTC CGAGACTATC TCCTTTGCGA CGGAGTTCAA CTTCCCGCGG GAGCGCGCAC ATCGGGTATG CTCGCTATGA GCGGCGTCGG TGACGACGAA AGTGTGTGGT CGAGCGACAG TGAGGCGGAA GAAGTCTCTA ACGAACTGTT CCATTTCTCC GCACTAAATT CTGCCATTGA TGCAGCGATC CGGCGCCTCG GAGGGCTCGT GGCACCCAAA CTGAACTGGT CGTCTCCGAA AGACGCAATT TGGGTCAACG GAGGTACGCT GCAGTGCAAG ACAGCTGGGG ATGTTTACCT CCTCCTCAAG AGTAGCGATT TTTGCGCTTT TGACATTCAG CACTCCTGGA AAGAAGTCCG TGACGGCGAC GACACCAGCG ACGAGACGGC TACCGACTGT CACGGAGCAA TACCACTACA GCTTGTCTTG CGAAAATGGT GCAACCTCTA TCCCAGTCAA GAGTTTCGGT GCTTCGTCCG AGAACAGGAG CTAGTTGCTG TGAGCCAAAG ACAGCACTCG CAACACTTCG AGCATCTTGT ACGAGATCAG TACCTAATTC GGTCTCTAGT GGTTGAGTTT TTCGACGAGA TCATCAAACC CCATTCCCAG TCGTTGAACA ATTATACTTT TGACGTTTAT CTGGACAAGA AAGAACGCGT TTGGCTGGTA GACTTCAATG TCTGGGGTCG TCGTACGGAT CCTCTCTTGT TTACCTGGGA CGAGTTG
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Protein sequence | EVHACQFSSW YATFANLPPN ELGRKNVTVP SEILNLPETF RDYLLCDGVQ LPAGARTSGM LAMSGVGDDE SVWSSDSEAE EVSNELFHFS ALNSAIDAAI RRLGGLVAPK LNWSSPKDAI WVNGGTLQCK TAGDVYLLLK SSDFCAFDIQ HSWKEVRDGD DTSDETATDC HGAIPLQLVL RKWCNLYPSQ EFRCFVREQE LVAVSQRQHS QHFEHLVRDQ YLIRSLVVEF FDEIIKPHSQ SLNNYTFDVY LDKKERVWLV DFNVWGRRTD PLLFTWDEL
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