Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11041 |
Symbol | |
ID | 7197870 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 463527 |
End bp | 464345 |
Gene Length | 819 bp |
Protein Length | 240 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178516 |
Protein GI | 219115441 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCACATTC TTTACTGCGA CGAGCACATA TGTGTTGTGA ACAAACCCAG TGGAATTCTC AGTGTGCCCG GTCCACGCCG GAATCCATCT ATCGCCAACT TAGTGTATGA AATTTTAAAT CCACCCATTG ACATTGATCA GATGGTGGTT CATCGGATTG ATATGGATAC GAGCGGCGTC CTGGTGTTTG CCCTCACTGA GTTGGCGCTC CGTCAGTTGC ACGATGACTT TCGATCGCGC CGCGTCAAGA AAACGTACGA GGCCTTGTTG GCGGGACATT TTCGCAAAGC GACACAGGTC GAGATCGACG TCGCGCTAGA ACGCGATCCT TATCACCCAC CTTTTATGCG TGTGGCGCAA ACATCTGTCC GTGTACCTGC CAATGATAGC GATATTGGGA ACCGCAAAGA TCAGCCACCT ATTCACGTCA ATTTTCGCAA ATTTATCAAC CAAGCGCCCA AGCCCAGTCT GTCGACCATG ACTGCAGGAT CCTTGGAGTA CTTATTGTCG TCCTCCGAAG ACAGCCTTCC CGTTTCGAGA GTCCATATGT CACCCCACAC GGGCCGTACA CACCAGTTGC GAGTGCACGC CGCTGCTTTG GGATACCCGA TTATAGGAGA TGACATTTAC GGCTTTGAAG GAGAAGGTGA TTGCGGCGTG AACAGTACCA TTTTGGATCA ACTCATCCCC AATCGAATGT CTTTGCACCA ACAACTGCAG GAGCTGCAGT TGCCGCTCTG TTTGCACGCC AAACAACTGT GTATATTTCA TCCCTTCAGC GGAGCACCCA TGATTTTCGA ATGTGAAGCC CCCTTTTGA
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Protein sequence | LHILYCDEHI CVVNKPSGIL SVPGPRRNPS IANLVYEILN PPIDIDQMVV HRIDMDTSGV LVFALTELAL RQLHDDFRSR RVKKTYEALL AGHFRKATQV EIDVALERDP YHPPFMRRYW EPQRSATYSR QFSQIYQPSA QAHLPVSRVH MSPHTGRTHQ LRVHAAALGY PIIGDDIYGF EGEGDCGVNS TILDQLIPNR MSLHQQLQEL QLPLCLHAKQ LCIFHPFSGA PMIFECEAPF
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