Gene PHATRDRAFT_11041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11041 
Symbol 
ID7197870 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp463527 
End bp464345 
Gene Length819 bp 
Protein Length240 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178516 
Protein GI219115441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACATTC TTTACTGCGA CGAGCACATA TGTGTTGTGA ACAAACCCAG TGGAATTCTC 
AGTGTGCCCG GTCCACGCCG GAATCCATCT ATCGCCAACT TAGTGTATGA AATTTTAAAT
CCACCCATTG ACATTGATCA GATGGTGGTT CATCGGATTG ATATGGATAC GAGCGGCGTC
CTGGTGTTTG CCCTCACTGA GTTGGCGCTC CGTCAGTTGC ACGATGACTT TCGATCGCGC
CGCGTCAAGA AAACGTACGA GGCCTTGTTG GCGGGACATT TTCGCAAAGC GACACAGGTC
GAGATCGACG TCGCGCTAGA ACGCGATCCT TATCACCCAC CTTTTATGCG TGTGGCGCAA
ACATCTGTCC GTGTACCTGC CAATGATAGC GATATTGGGA ACCGCAAAGA TCAGCCACCT
ATTCACGTCA ATTTTCGCAA ATTTATCAAC CAAGCGCCCA AGCCCAGTCT GTCGACCATG
ACTGCAGGAT CCTTGGAGTA CTTATTGTCG TCCTCCGAAG ACAGCCTTCC CGTTTCGAGA
GTCCATATGT CACCCCACAC GGGCCGTACA CACCAGTTGC GAGTGCACGC CGCTGCTTTG
GGATACCCGA TTATAGGAGA TGACATTTAC GGCTTTGAAG GAGAAGGTGA TTGCGGCGTG
AACAGTACCA TTTTGGATCA ACTCATCCCC AATCGAATGT CTTTGCACCA ACAACTGCAG
GAGCTGCAGT TGCCGCTCTG TTTGCACGCC AAACAACTGT GTATATTTCA TCCCTTCAGC
GGAGCACCCA TGATTTTCGA ATGTGAAGCC CCCTTTTGA
 
Protein sequence
LHILYCDEHI CVVNKPSGIL SVPGPRRNPS IANLVYEILN PPIDIDQMVV HRIDMDTSGV 
LVFALTELAL RQLHDDFRSR RVKKTYEALL AGHFRKATQV EIDVALERDP YHPPFMRRYW
EPQRSATYSR QFSQIYQPSA QAHLPVSRVH MSPHTGRTHQ LRVHAAALGY PIIGDDIYGF
EGEGDCGVNS TILDQLIPNR MSLHQQLQEL QLPLCLHAKQ LCIFHPFSGA PMIFECEAPF