Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11014 |
Symbol | |
ID | 7198029 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 265765 |
End bp | 267897 |
Gene Length | 2133 bp |
Protein Length | 677 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178196 |
Protein GI | 219114801 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCAGC AACGCCGCGG CATTCTCGGT ATCTCCAGTG CCGTGGACAA GCGTCTGTAC CGGGCCGCCA AGTCGGTCAT GCCGGCAATT TCCAAGACGG AAGAAATCGC ACTGGGCTGC GGTACGATCG GATTCGACCG GGACATTTTC ACCGGAAGCC CGTCGCTTAA GCATCTCGTG GATACGTACA AGCCCAAGTT GACGCCGGAA GAACAGAGCT ACCTGGACGT GCAAGTCAGT GAACTGTGTG CGCTGTTGAA CGATCACGAT GTTGTGGAAC GCAAGGATTT CAGCAAGGCG GCGTGGGATT ACATGCGCGA CGAAAAGTTC TTCGGTATGA AGATTCCCAA AGAGTGGGGA GGTCTCGGGT TTTCGACACA AGCCGTGTCT CAGGTTCTCG CCAAGCTGGG TACCCAGTGC ATGGACGCCA ACGCGACGGT TGCTGTGCCC AACTCGCTCG GACCCGGGGA ACTCCTGGCA CGATACGGAA CACCAGACCA GAAGGAATAC TTTTTGCCAA GACTAGCGGA CGGTACCCTC ATTCCTTGCT TTGGTCTCAC TGGACCGCAT TCCGGAAGTG ACGCAACCTC TCTTATTCAG AGTGACTGTG TCGTGGAAGA ACGCAATGGC GAGATTGGTG TCGTCGCCTC TTTCAAGAAG CGTTACATTA CCCTGGCACC CGTTGCGGGT GTTGTCGGAT TGGGCCTCAA CCTGGCCGAT CCCAAGGGAC TCCTCAAGGG TAAGGGTGGT GAAGGATTTA CGGTCGCCTT GCTCGAACGC GATCATCCCG GCCTCCGCAT GGGACCCCGT CACATGCCAC TCAACGCCGC CTTTATGAAC GGAACCGTCG AAGGGGAAGA CGTATTTATC CCCATGAGTA TGATCCTCGG AGGACAAGAT CGCTGCGGTA GCGGCTGGCA AATGTTCGTC GAGTGCCTGG CGGAAGGCCG TGGCGTGAGT CTCCCCGCTG GATCGGTCGG CGCCGGACGC GGTGTCGTCA CCGGGGTGGG TGCCTATTCG CGCGTGCGCA AACAATTCCG TGTCCCCATT GCCGAATTTG GTGGAATTCA AGAAGGTTAG TCTCGTTGAT TGGTGTGGAA TTCCGACGTT GCCATTGTGG AATGTGGTTT CTCATGGCAT GTTTTTCTGC TGTTTTCTTT TTGAATTTGT ACTTTAGCCA TGTCATTGGC TGCCAGCGAT ACCTTGATTG CTATTGGTGG TACCGATCTG ATGAACGCGA TCGTGGATAA TCACGAAGCA CCTATGGTTA TTTCGTCGGT CATGAAGCAG AATTGCACCG AACGTGGTCG ACGGATCGTC GAACGCGGCA TGGACGTTGC CGCGGGTTCG GCTATTTGCC GGGGTGAGAA AAACTACCTG GCCAACGGCT ACACGAGCTT ACCCATTGCG ATCACGGTGG AGGGTGCCAA CATTATGACA CGCTCTTTCC AAATCATCGG GCAAGGTCTG ACCCGATGCC ATCCGCATAT GTTGGAATTG ATTCAATCGT TGCAAATGCC GGCGGACAAG GAAAAGGAAG CCGTGGAAAT TTTCACCAAG CAGTTTTACA AGGTACTCGG GCACGGTGTA TCGAACTTTG GCCTTTCGGT CACCCGTGGG TTGGGATCCA CGGTTTCTAC CGCGTTCCGA TCCAAAACTG CGTACAAGGA CGGAGACAAG CTCGTTGAAT ACCACGAAAA GCAGCTATTG CGGTTGTCGG CTAATTTTGC CATGACCGCG GATTTGTGCT TTACTCTAGG AGGGCGACTA AAGTTTGAAG AATTGTTGAT GGGTAGGTTG GCGGATGCCC TCGGCGCCAT CTTTCTCGGA TACTCGACTT TGCACCACTA CCAGCGTCGT CGTGGCGTGG CCGGTCTGGA GGCCATTACG GAACACGCCA TGTTGCGCCT AGAAACCGAG GCGCAAGATG CGCTCAAGGT GGCTTCGGAC AACTTTCCGG GACCGCTCGG TCCCGTCGCT AGTTTGGTCA TGAAAGCCGG ATGCTTCCCG CTCGGTAATT TGACTCGCCC TTACAAGGAA CCGAACGACA CGCTTACCAA GGAGGTGGCA AGATTGGTCA CTACCCCGTC AGAATTGCGC GACATGTTTG CCGAGGGAAT TTATACCGCC CCC
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Protein sequence | MRQQRRGILG ISSAVDKRLY RAAKSVMPAI SKTEEIALGC GTIGFDRDIF TGSPSLKHLV DTYKPKLTPE EQSYLDVQVS ELCALLNDHD VVERKDFSKA AWDYMRDEKF FGMKIPKEWG GLGFSTQAVS QVLAKLGTQC MDANATVAVP NSLGPGELLA RYGTPDQKEY FLPRLADGTL IPCFGLTGPH SGSDATSLIQ SDCVVEERNG EIGVVASFKK RYITLAPVAG VVGLGLNLAD PKGLLKGKGG EGFTVALLER DHPGLRMGPR HMPLNAAFMN GTVEGEDVFI PMSMILGGQD RCGSGWQMFV ECLAEGRGVS LPAGSVGAGR GVVTGVGAYS RVRKQFRVPI AEFGGIQEAM SLAASDTLIA IGGTDLMNAI VDNHEAPMVI SSVMKQNCTE RGRRIVERGM DVAAGSAICR GEKNYLANGY TSLPIAITVE GANIMTRSFQ IIGQGLTRCH PHMLELIQSL QMPADKEKEA VEIFTKQFYK VLGHGVSNFG LSVTRGLGST VSTAFRSKTA YKDGDKLVEY HEKQLLRLSA NFAMTADLCF TLGGRLKFEE LLMGRLADAL GAIFLGYSTL HHYQRRRGVA GLEAITEHAM LRLETEAQDA LKVASDNFPG PLGPVASLVM KAGCFPLGNL TRPYKEPNDT LTKEVARLVT TPSELRDMFA EGIYTAP
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