Gene PHATRDRAFT_10882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10882 
Symbol 
ID7197955 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp122298 
End bp122831 
Gene Length534 bp 
Protein Length148 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178167 
Protein GI219114743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.233419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACGTGCCCG TACGCATTCA CGATCAGTGT CTCACGTCCG AAGTCTTTCG ATCCCAACGG 
TACGTGACTT GACGAACGCA TCCTTTTGCA TACAATCCAC TCGTTCTTAC TCACACTCGC
AAATTATGTC CCACACTCTC TCGTACTAGC TGTGATTGCA AAGAGCAGTT GCACATGGCC
TTGCTGTACA TTCAAAAACA CGGCGGATGT ATTATTTATC TACAACAGGA AGGTCGAGGC
ATTGGATTGG CCAACAAGGT GGCGGCATAC GCCTTGCAGG ACAATGGGCT GGACACGGTG
GACGCCAATC TGCATTTGGG CTTCCCCGAA GACAGTCGCG AGTACGGTGT CGTCAAGGCC
ATTCTGCGAG ACATGCAAAT AGGTTCCATC CAACTCATGA CTAACAATCC GCGCAAGGTA
GAACGCATGG CTCGACTCGG TATCGTCGTT GACCGGACCC TACCCATGGT GGTTCCACAA
ACGAATCCGT ACAACCACAA GTACATGGAA ACCAAAAAAA CGCGCATGAA CCAC
 
Protein sequence
HVPVRIHDQC LTSEVFRSQR CDCKEQLHMA LLYIQKHGGC IIYLQQEGRG IGLANKVAAY 
ALQDNGLDTV DANLHLGFPE DSREYGVVKA ILRDMQIGSI QLMTNNPRKV ERMARLGIVV
DRTLPMVVPQ TNPYNHKYME TKKTRMNH