Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10882 |
Symbol | |
ID | 7197955 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 122298 |
End bp | 122831 |
Gene Length | 534 bp |
Protein Length | 148 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178167 |
Protein GI | 219114743 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.233419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CACGTGCCCG TACGCATTCA CGATCAGTGT CTCACGTCCG AAGTCTTTCG ATCCCAACGG TACGTGACTT GACGAACGCA TCCTTTTGCA TACAATCCAC TCGTTCTTAC TCACACTCGC AAATTATGTC CCACACTCTC TCGTACTAGC TGTGATTGCA AAGAGCAGTT GCACATGGCC TTGCTGTACA TTCAAAAACA CGGCGGATGT ATTATTTATC TACAACAGGA AGGTCGAGGC ATTGGATTGG CCAACAAGGT GGCGGCATAC GCCTTGCAGG ACAATGGGCT GGACACGGTG GACGCCAATC TGCATTTGGG CTTCCCCGAA GACAGTCGCG AGTACGGTGT CGTCAAGGCC ATTCTGCGAG ACATGCAAAT AGGTTCCATC CAACTCATGA CTAACAATCC GCGCAAGGTA GAACGCATGG CTCGACTCGG TATCGTCGTT GACCGGACCC TACCCATGGT GGTTCCACAA ACGAATCCGT ACAACCACAA GTACATGGAA ACCAAAAAAA CGCGCATGAA CCAC
|
Protein sequence | HVPVRIHDQC LTSEVFRSQR CDCKEQLHMA LLYIQKHGGC IIYLQQEGRG IGLANKVAAY ALQDNGLDTV DANLHLGFPE DSREYGVVKA ILRDMQIGSI QLMTNNPRKV ERMARLGIVV DRTLPMVVPQ TNPYNHKYME TKKTRMNH
|
| |