Gene PHATRDRAFT_10872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10872 
Symbol 
ID7197847 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp376971 
End bp377851 
Gene Length881 bp 
Protein Length261 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178493 
Protein GI219115395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTAA TAATTTGGTT CTCTCAGAAT GATGGAAACC GAGCAGCAAA CGCCAAGCAC 
TTAATAATAG TAGCCGGTCA CTCGGTGGCA ATTTCAGGAC ATCTCGAAGA CGCGGGTCGC
GATGAGACCG ACTGGTATCT TTTGCCGTAT CAAAAGAATC GTGGTCTTCC CGCTGCAATA
GTCGGCCACA TAAATACAGG GTTGAATGCT GCTGAGGAAG ACGAGCAGAG CCTTCTCATT
TTTTCCGGTG GTGAGACCCG TGCCAGCACT GGGCCAGAGA CTGAAGGCGC GAGTTACTAC
AGAGTTGCCG ATGCAATGAA TTTATGGCCC GAGAACTCAA GTGTACGCGC TCGAACAATA
TCTGAAGAAT TTGCCACAGA CAGCTTTGAA AATTTGTGAG TTAGCAGAGA GTGACATGTA
AACATGCATC AGCACAAGGA CATCGTCTGA TATGCTTGGC CTCTCCTAAT CTTATATTGT
CTCCTCGCAG AATGTTTTCT ATCTGTCGTT TCCAAGAGAT AACAGGGTCC TATCCCGAAA
AGGTCACTGT TGTCTCGTTC ACATTTAAGA AGCGTCGTTT TGAAGAGCTC CACGCACAGG
CCTTGCAATG GCCCAAACAA TCCTTTTCTT ACATTGGTGT CGACCCAGAA GCTAACACTG
GATTCAACCT CCAGGAAGCC GTTGTGGGAG AGCTTGAAAA TGCTGCTAAA CCTTTTGAAA
TCGATCCTTA CGGATGCCAC TCCCAAGTCC TTCAGGAAAA GCGACGATCT CGAAATCCTT
TCAAAAGAAC ACCACCGTAT GAGCTTTCTT GCCCCGACAT GAAAGAGCTT CTCAGCTATT
GCGGTCCTGC AATCATACCT AAGTCCAAGG TTCCATGGTA G
 
Protein sequence
MSLIIWFSQN DGNRAANAKH LIIVAGHSVA ISGHLEDAGR DETDWYLLPY QKNRGLPAAI 
VGHINTGLNA AEEDEQSLLI FSGGETRAST GPETEGASYY RVADAMNLWP ENSSVRARTI
SEEFATDSFE NLMFSICRFQ EITGSYPEKV TVVSFTFKKR RFEELHAQAL QWPKQSFSYI
GVDPEANTGF NLQEAVVGEL ENAAKPFEID PYGCHSQVLQ EKRRSRNPFK RTPPYELSCP
DMKELLSYCG PAIIPKSKVP W