Gene PHATRDRAFT_10800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10800 
Symbol 
ID7197764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp719444 
End bp720559 
Gene Length1116 bp 
Protein Length371 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178288 
Protein GI219114985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.929663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTCG AACGAAAGAC AACGATTGGA AAAGCAATAT CGGCTCCACT ATCAACCATG 
GCCCTGGCGT TGACCGTGGC GAATTTGGGC GTCATACCTT TCTCGTCAAG CGTTTATAGT
ATGATCAACC AATACTTGGT GCCGCTTGCT GTTCCGATGT TGCTTTATGA TAGTGATATT
CGTCGCGTCA TTCGAGACAC CGGGACTCTC TTGCTAGCAT TTGGTGTCGG TGCAATTGCC
ACCGTTGTTG GTACGCTGGT TTCCTTTCCC ATTCTACCAA TGACATCGCT GGGTGATGAT
GGATGGAGAG TAGCCTGTGC TCTGGCGGCG CGCCACATTG GAGGAGCCAT CAACTTCGTG
GCAGTTGCGG AAACGCTGCA GATTTCGGGC ACAGTCGTCT CGGCCGCGAT TGCAGCCGAC
AATGTCGTTG TGGCTCTATA TTTCGCATTT CTATTCGCAA TTTCGAATGC TGATCAGGTG
GATGGACCCT CATCAGATTC CGGAACAAGC GACGCTTTGG AACTCGATGC AAGCGGAAGC
GAAGTCGAGT ATTCGGAGGA TAGTATTTCC TTGTCATCAT TGGGTATTGC CCTGTCTGTA
GCGTCAGGAC TAGTAACGAC CGGAAGAATC TTGACAAACT CTGTTTTGCC ATTGGGGACC
TCCGCATTGC CACTGACGTC CGTGCTTACG GTAGCTGCGG CCACCATCTT CCCGAAGTTT
TTCGTCAATA TACGTGCCGC TGGGAGTGCG CTTGGTATCT TGTGCATCCA AATGTTCTTT
GCAGCGTCGG GTGCAGCTGG CTCGATTAGC CTCGTTATGC AGAAAGCCCC ATCGTTGTTT
GCGTTTTCAG CGTTGCAAAT TGGTGTCCAT TTTGGCGTCC TCATGTCGGT CGGCCGCGGT
ATCTTTCGGA TCCCGAGTAA GGAGCTCTAC TTAGCATCCA ATGCGAATGT CGGGGGGCCT
ACGACTGCCG CCGCAATGGC AAAAGCCAAA GATTGGAAAT CATTGGTACT GCCAGCTCTG
CTAGTGGGAA TTCTTGGCTA CGCATCTGCA ACCGCAATTG CCCTAGCACT CGGGCCAATT
CTTGTCCGGC TTCCTCTTAT TGGCGAAAAA TCCTAA
 
Protein sequence
MSLERKTTIG KAISAPLSTM ALALTVANLG VIPFSSSVYS MINQYLVPLA VPMLLYDSDI 
RRVIRDTGTL LLAFGVGAIA TVVGTLVSFP ILPMTSLGDD GWRVACALAA RHIGGAINFV
AVAETLQISG TVVSAAIAAD NVVVALYFAF LFAISNADQV DGPSSDSGTS DALELDASGS
EVEYSEDSIS LSSLGIALSV ASGLVTTGRI LTNSVLPLGT SALPLTSVLT VAAATIFPKF
FVNIRAAGSA LGILCIQMFF AASGAAGSIS LVMQKAPSLF AFSALQIGVH FGVLMSVGRG
IFRIPSKELY LASNANVGGP TTAAAMAKAK DWKSLVLPAL LVGILGYASA TAIALALGPI
LVRLPLIGEK S