Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10747 |
Symbol | |
ID | 7197780 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 791530 |
End bp | 792306 |
Gene Length | 777 bp |
Protein Length | 246 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178304 |
Protein GI | 219115017 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.095057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCGGCTTCCG CGTTTGAGGT GAAGAAGGTA GTCGTGGCGG GAGCCACAGG CCAGACAGGC CGTCGTGTTT TGGAGAAGCT TGCTTCACAG CCAGGTCTCG CTGTGATCGG AGGAGTGCGC AATATCGAGA AAGCAACCAA ATCTCTGAGC GAGTCTTCCA CGGTCGTTCG CGGCGCTATG ATACAGAGTG TGTCGTCAGT TGACACCTCG CGTGTAGAGC TAAAGCGCAT GGACGTTGTG AACAACTCGA TAGACGATCT TGCGAAAACT CTCGAGGGCG CCGACTCGTT GGTAATTGCG GTGGGCTTCA TTCCTGGAAA CCCCTTGAAA ATGAACGATG CCGCTCGCAA AGTCGACAAC ATTGGGACGT GTGCCTTGAT TGATGCGGCT AAAAGATCCG GCACCGTTAA AAAAGTAGTC ATGGTCTCCT CAATCCTCAC CAATGGTCGC GCATGGGGAC AGGAAAAGTC CCCCGGTTTC GTTGTCACTA ACGCCTTTGG TGGAGTTCTT GATGAAAAAC TTGTGGCGGA GAACTATCTA CGTGCCTCTG GTCTCGACTA CACAATTGTC CGTCCGGGCG GTTTGAAAGC GAAACCCCCA ACCGGCGGCC TTATTGTTTC CGGAGAGGAC ACGCTCAATT CGGGCGAGAT CTCGCGAGAT CTTGTTGCCG ATGTCTGTGT TGCCTCGTTA ACGGATGCCA AGGCTTCAAA CAAAGTCTTG GAGATTATCG AAGCCGACGA AGGCGGTCCC AAGGTCTTCA ACGGCCTGAA TATGTGA
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Protein sequence | AASAFEVKKV VVAGATGQTG RRVLEKLASQ PGLAVIGGVR NIEKATKSLS DVSSVDTSRV ELKRMDVVNN SIDDLAKTLE GADSLVIAVG FIPGNPLKMN DAARKVDNIG TCALIDAAKR SGTVKKVVMV SSILTNGRAW GQEKSPGFVV TNAFGGVLDE KLVAENYLRA SGLDYTIVRP GGLKAKPPTG GLIVSGEDTL NSGEISRDLV ADVCVASLTD AKASNKVLEI IEADEGGPKV FNGLNM
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