Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10677 |
Symbol | ATPase1-1B |
ID | 7197661 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 483448 |
End bp | 486159 |
Gene Length | 2712 bp |
Protein Length | 883 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | P1B, P type ATPase |
Protein accession | XP_002178233 |
Protein GI | 219114875 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.704376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAATTC GCGGCATGAC CTGTAGCATG TGTGCGCAAG CAATTGACGT AAAGTTGCGC AGTGTCCCTG GCGTGACGGA AGTCGCCATC AATCTCACGA CCGATACGGC GACGGTGGCG TTTCGGCCCC GCGATTCCGA AACGAAGGGG AGATTGGAAG AGCTCACGGG CGCCATTGAA GATGCGGGTT ACGAAGTGGT TACCGCGCGA CTCATGAATT GTGAAAACGG CAGTTCCGAA CCACGGGGCA AAGCGGAACT GGTGATTCAG GGCATGACTT GCAGCATGTG CGTACAAGCG ATCGAAAACG TGGTGCGACA AGATTTACAG AACACCACCA TTGCCATTCA CCTTTCTACC GACACAGCGG TGGTGGACTG GGATACGACC AAATATTCAC TGGAAACAAT TCAGGAAACA ATTGAATCGA TCGGGTACAC CGTCACGAGT GCGAATGAGC TACCAGAGAA CAACTCCACG GAAAGTACAT CTATGGAAGA AAGCTGGGAG CACTTTACGC GCCGACAGGA AGCCAAAGTC CAAGCCCAAC GTCGGGCCTT TCTCTCGAGT TTGGCGGGGA CCTTGCCTAT ACTTCTTTTT ACCATGGTGT TTCCGCATAT CTTGCCATCG CATACGTTCC TAAATCGCCA CATCTCCATT TGGGGATACG ATCTGGAATG GCAAGCTCTC ATTTTATGGA TCCTCGCCAC ACCGGTTCAA TTTATCACTG GTTGGGGCTT TTACAAACAC GCATATTTCG GGATTATGTC GGGAAAGGCG GGTATGGATG TTCTGGTGGC GTTAGGGACG ACGGCTTCGT ACGGATACGC TCTGGAAGGT TTGCTGACGG GCGACGATGA AGCCGCACAC TTTTTCGAAA CGTCGGCCGT TTTGATTTGT TTCGTCCTTG CCGGCAAATG GATGCAAGTG CTGGCCGTCC GGCGCACCAG CGAGGCGTTG ACGGCCTTGA TGAAATTGCA AAGCAAGACG GCCGTGAAAA TAACGCCCGG CAACAAAGTT TCCAGCGCTT CTTTCAACCC ACTATTCGAT CCATACCACG AAGCAGTAGT TCCAATCCAA GAGGTCCACG CAGGGGATAT GGTCAAAATT ATTCGCGGTG CGTCCATTCC TGCCGACGGG AACGTTTTAT TTGGAGAAGT CTCGGTGGAC GAAAGCATGG TCACGGGCGA GTCGGTGCCA GTGCTGAAAG GCCCCGGGTC GGTGGTGTTG GGGGGTACCG TCTGTGTCGA ATCTTCTTCG ACGGTTGCTG GTGACGAACT CGCCGAAAAC GCCAACGACC AAGCAGTCGG AGCCGCTTTC GTGGAAGTCA CTGGCGTGGG GTCGTCCACC GCTTTGGCAC AAATCGTTCA ACTCGTCCAA GAAGCACAAA CTCGATCCGT CCCCATCCAA AGTTTTGCAG ACCGCATCTC GGGGATCTTT GTTCCAACGG TGTGCACGAT TTCGCTGCTC ACATACATGG TCTGGTACGC GCTGTGTTCT TCGAAAGTCG TTCCAGCTTC GTGGTATGAC GACCTTGGTG AGAGTATGAC CACGTTTAGC CTCAAGTTTG CCATTGCTTG TCTCGTTATT TCTTGCCCAT GTGCCTTAGG ACTGGCGACG CCGACTGCCG TCATGGTGGG TACCGGGGTG GGCGCCAAGT TGGGTGTTTT GATGAAAGGA GGGGAGGCGC TTGAAGTGGC CAGCAAGGTA AATTCGGTCG TCTTTGACAA AACGGGAACC TTGACGCAAG GAAAACCAGC GATCACGGAC TTTGTGAGAC TCGACGAAGA AAATCCAAAC GATTGGCCGG AGGATGATTT GCTCTGGATG CTGGCATCCT TGGAGCGGAC ATCAGAACAT CCTCTGGCGA ATGCGGTAGT CTCGTACGCT GAAGAACATT TGAGTGTGGA TTATCTGGAA CAACATCCTT TTGCACAACC CTCCAATTTT CGAGCGATTA CTGGACGGGG TGCATCTGGA GTTGTTCAAG GCACATCGGT AGCTGTTGGT AATCGATCGT TTGCCAACGT GCTGAATATC TCGGTACCGG CGCAAGCGGA AGCCGTCATG AAAAGGCTCG AAGAGCAGGG CAAGACTGCC ATTCTAGCTG CGTTTAACGA CCATGCCTAC GTGGTGATGG GGATTGCAGA CGAGCTCAAG TCGGATGCGG CTGCTTCGCT ATCCTATCTG AAAAATACGT TGGGCGTCGA TATTTGGATG GTTACCGGGG ACAATAGTCG AACGGCAAAA GCCATTAGTC GTAAGCTCGG TTTGGCCCCG AACCGCGTCA TCTCCGAAGC CTTACCCGCC GCCAAGGTCC AAAAAGTGCG ACAGCTGCAA GCCGAAGGTC GAGTGGTCGC CATGGTAGGT GACGGGGTCA ACGATAGTCC TGCCTTGGCG CAAGCCGACG TGGGCATGAG TGTCGGGACG GGGGCCGACA TTGCGGCGGA AGCGTCCGAC ATGGTGTTGG TCAAGGCGCA CGTGACGGAT GTTTGCGTCG CGCTGCACTT GAGTCGCGTC ATTTTTCGAC GCATTCAACT GAACCTGCTA CTATCCCTCG TATACAATTG TTTGGGTATC CCGATTGCGG CGGGTCTCTT CTACCCGTAC GTGCGGACGC GGCTACCGCC GACCGTAGCG GCTCTGGCCA TGGCCTTAAG TTCCATCAGT GTCGTATTGA GCAGTTTGAG TCTCCAACTG TACCAGCCCC CG
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Protein sequence | LEIRGMTCSM CAQAIDVKLR SVPGVTEVAI NLTTDTATVA FRPRDSETKG RLEELTGAIE DAGYEVVTAR LMNCENGSSE PRGKAELVIQ GMTCSMCVQA IENVVRQDLQ NTTIAIHLST DTAVVDWDTT KYSLETIQET IESIGYTVTS ANELPENNST ESTSMEESWE HFTRRQEAKV QAQRRAFLSS LAGTLPILLF TMVFPHILPS HTFLNRHISI WGYDLEWQAL ILWILATPVQ FITGWGFYKH AYFGIMSGKA GMDVLVALGT TASYGYALEG LLTGDDEAAH FFETSAVLIC FVLAGKWMQV LAVRRTSEAL TALMKLQSKT AVKITPGNKV SSASFNPLFD PYHEAVVPIQ EVHAGDMVKI IRGASIPADG NVLFGEVSVD ESMVTGESVP VLKGPGSVVL GGTVFGAAFV EVTGVGSSTA LAQIVQLVQE AQTRSVPIQS FADRISGIFV PTVCTISLLT YMVWYALCSS KVVPASWYDD LGESMTTFSL KFAIACLVIS CPCALGLATP TAVMVGTGVG AKLGVLMKGG EALEVASKVN SVVFDKTGTL TQGKPAITDF VRLDEENPND WPEDDLLWML ASLERTSEHP LANAVVSYAE EHLSVDYLEQ HPFAQPSNFR AITGRGASGV VQGTSVAVGN RSFANVLNIS VPAQAEAVMK RLEEQGKTAI LAAFNDHAYV VMGIADELKS DAAASLSYLK NTLGVDIWMV TGDNSRTAKA ISRKLGLAPN RVISEALPAA KVQKVRQLQA EGRVVAMVGD GVNDSPALAQ ADVGMSVGTG ADIAAEASDM VLVKAHVTDV CVALHLSRVI FRRIQLNLLL SLVYNCLGIP IAAGLFYPYV RTRLPPTVAA LAMALSSISV VLSSLSLQLY QPP
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