Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_44063 |
Symbol | |
ID | 7204236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 853140 |
End bp | 854197 |
Gene Length | 1058 bp |
Protein Length | 348 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186423 |
Protein GI | 219113679 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.213778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTTTCTTCAC CATGGTTACC CTGACCTCCG TAACTACTGG GTCGACGCAA AAATTTTGCC ATGAGAGTTC CACGTTCTCA ATATGGTCGA GAAGGTCTTT TTGGTTGGGA ATTTTGTCGC TGCTTGTTGT GTTATTGAAG GAGACGTCAG ACTCCGGGGA CGAAGTGTTG TCGTCGTTGA CTGCGCATAA AATTCCGCCA CTGTCTCAGG ATTCTGAGTA TTTTCCGAGT CGCTGCATAG ATCCGGATGA TCGTTCCGAG ATGCCAACGT TGCCTTTTGA ATCAAAGAAT TCCGGGCGTC CTTGTCAGTG CCAAGATCCG ACGCAGGCCG CCCAGCGAGA AGCGACCATT TGGGACAAGC ATCACGAAAC GCTCGTGCAG ATAACGGGAC AGAACGGTAG TGTGCTAGCC TTGTCTTCGC CTGATGTCGT GTTTCTTGGA GACTCTATTA CCGAACGAAT GATGGGGACC GGCCATATGG GAACCCGCGA ATACCCAGCG TCCAAGGCCG TTTTCGATCG GCACTTCAAC AAGGAGGACG GTACACTTGT GTCTCTGCGC GGACTTGCTT TGGGATCTTC AGGTGACACT AGTCCCGAAC TTTTATGGCA TTTGGAAAAT GGTCTTATCC CGCCGACATT ACGACCGAAA GTCTGGGTAC TGTTAGTAGG AACGAACGAT CTGGGTCGAG CAGGCTGCTC GAAGCGCACT GCCTTGGCAG GTATCTTGAA TGCCGCACAT CATTTGAACG CACAACAACC GGAGACGCCT CTGGTTATTC ATGGACTCTT ACCTCGTTCA CAGGATAAGA GCTCGAGCAA ACTGGGTCGG TATTGGGTCC AGATTCAATG GATCAATAGC GAGTTGAAAC GGATCGTGGC CAGACAGCCG AATTGGCATT ACATAGATTC ACAGCACATA TTCTTACAAG ACGAGTTCGA TATTAATGCG AAGCTATTAC CGGATGGTTT GCATCCCAAT GCGGAGGGCT ATGATTTATG GCTGCCGTTA ATTGCGCATC AAGTTTCGGA AATTATACTC CGCAGGGACC CTTCATAG
|
Protein sequence | MVTLTSVTTG STQKFCHESS TFSIWSRRSF WLGILSLLVV LLKETSDSGD EVLSSLTAHK IPPLSQDSEY FPSRCIDPDD RSEMPTLPFE SKNSGRPCQC QDPTQAAQRE ATIWDKHHET LVQITGQNGS VLALSSPDVV FLGDSITERM MGTGHMGTRE YPASKAVFDR HFNKEDGTLV SLRGLALGSS GDTSPELLWH LENGLIPPTL RPKVWVLLVG TNDLGRAGCS KRTALAGILN AAHHLNAQQP ETPLVIHGLL PRSQDKSSSK LGRYWVQIQW INSELKRIVA RQPNWHYIDS QHIFLQDEFD INAKLLPDGL HPNAEGYDLW LPLIAHQVSE IILRRDPS
|
| |