| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43852 |
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| Symbol | |
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| ID | 7204279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | + |
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| Start bp | 225978 |
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| End bp | 227889 |
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| Gene Length | 1912 bp |
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| Protein Length | 574 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186020 |
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| Protein GI | 219112873 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00767689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCATGAACCT CCCAAACAAC ACCCGACCTC GGGGAGCTTC TATTCGTTTC GGTGGGTATC
TCTGGCACCC TACATCTCAT TCGTATGGTA TAAAACAAAA GCACCATGAA AGACTCGGGC
AAACCGCCCC CGTATCGTCG TTCAGGACCA CACAATAATG AGGAGGAGGA GGAAGGGGGC
AACCGAGAGG ACGATCGGAA ACCTCCGGCA CGGGAAATCA GTATACACAC CACACCGAGT
ACGACAACAC ATCGCGACAA TGCCGAGTGT GACTCTTCCG TGGACGATTC CGCGCTCACA
CCTGCTTACG CCGCCATACC GACGCGTATG CATACGTCGG CGTCGACACC GCAACCCCTG
TTGCTGGCTT CCACGCCCGG GGAATCCCCC GACACGGACG ACCGCAAGCA GCGGCCATTG
CACAGTTCCG ACTTTCACAA ACCCATCCGT AACAACAACA ACAGCGTGGA CACGGAGTCC
TCTACACCGT TACGGAGTCG CACTTGGCTC AATCACGAAC TGTATTTCTG GTCCGGTGCC
TCGTTGCTCT CCGTGCTGCA ATTGCTGTAC CTTTGCTTGC CGCTTACCGC CTTGTGGACT
CTCTTGGTCT TGGTAATTTC CACCCTGCTC TTTGCGTGGA CGGCACTCCA ACGCTTGCGT
CTGGAATACC GGGAACGCAT CACGCAACAC GGATTGGCTG CCTACCTTCC CGAGTCCCTC
TCCCACACGC TCACGTCCCA AACCCTGCAC GAGTACCTCA CGGACGACTC GTTCGGGTTG
GAATACCGAC ACTTGCTGCT CTACTTTATG CCCGGTCTCT CCAATGAACA GATTGAACAA
TACGTTGATC AGTTGCCGCC GCGTCATCGG GAGGAATTGC GACGACACGG GATGGGATAC
TTTTTCGGTG ACGGCTTTAT GCGACTCTTG ATGGGCGAGC ACGCCTACCA GACACGTCAG
CAACAACAAC AACAAGGCGC AGCCGCACCC ACCAGCTTCT CCGATTTCCC AACAACTCTA
TCGGTAGCCA CCACACCAAC GGAAGCAACG GATACCTCCC GTCGTCGACT ATCGTACCAA
CGAGACGATT CCACTGCGTC TTCGAACAGT GACTTGGGTC TGCAAATTTC CACCGGCGAT
TTGGCGGGGG GTCATATGAA CGACGCGCAA GCCTGGAGCA TGGCTCAGTG GTTGGGTGTG
CGATCCCCGT CTTCGACGAT GACACCACCT ACGCGCAGCA ATACGACCAG TACGACCCGT
GGGGAGGCGA CGACCGCAAC CGGTACAACA AGTTCCCCCG CTGCCATCCT AGACGAATCC
AATCCCGAGG ATGACGACCG CCGTTTGCGG CGCGAGTATG CGGACGAAGA ACGCATCCTG
ACGGATGCCT TTTGGGACGC CTACCGTTCC TTGTACGCGT CCGTATGGAC TCCAACGGTA
CAGACTGTGA GAGAAAGGAT TACACAGCCT GTTACGAATA TGGTCGTACG CATTGGACTC
GGTGCGTTGA CGCTTTCGAG TGGGATTGGC GTTGTCGGCT ACTGGCAAGG CGTGTACGCG
CTCCCCTTTC GCCAAACCTT TCCCAGTAGC AGACACCATG GGTCGGCTCG TAATCACGAT
AGTCTTGGAC TCGCCTTAGT GCAAACGCCG TGGGATCGCC TACAGTTTCC ATCGTCCGAG
TCGTTGTGGA CAACCGCCGT GATGGGTGGC GCTTCGGCGG GAGTAGTCCT GTTTGCTCGT
GCATATTGGT CGATCGGGCG GAACACCGAG TCGACAGCGC GAAAGGGCGC GGGTAGCGAA
AACGAGCCGA AACAACAACG TGAAAATTAA AAAGACCACA TCGTTCACGT GTTTATCACG
GAACTAGTTA GATTCAAGCT CAGTTTTGAT TTGAGTTTTC TAGATTTATT TG
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| Protein sequence | MKDSGKPPPY RRSGPHNNEE EEEGGNREDD RKPPAREISI HTTPSTTTHR DNAECDSSVD
DSALTPAYAA IPTRMHTSAS TPQPLLLAST PGESPDTDDR KQRPLHSSDF HKPIRNNNNS
VDTESSTPLR SRTWLNHELY FWSGASLLSV LQLLYLCLPL TALWTLLVLV ISTLLFAWTA
LQRLRLEYRE RITQHGLAAY LPESLSHTLT SQTLHEYLTD DSFGLEYRHL LLYFMPGLSN
EQIEQYVDQL PPRHREELRR HGMGYFFGDG FMRLLMGEHA YQTRQQQQQQ GAAAPTSFSD
FPTTLSVATT PTEATDTSRR RLSYQRDDST ASSNSDLGLQ ISTGDLAGGH MNDAQAWSMA
QWLGVRSPSS TMTPPTRSNT TSTTRGEATT ATGTTSSPAA ILDESNPEDD DRRLRREYAD
EERILTDAFW DAYRSLYASV WTPTVQTVRE RITQPVTNMV VRIGLGALTL SSGIGVVGYW
QGVYALPFRQ TFPSSRHHGS ARNHDSLGLA LVQTPWDRLQ FPSSESLWTT AVMGGASAGV
VLFARAYWSI GRNTESTARK GAGSENEPKQ QREN
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