Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_33498 |
Symbol | |
ID | 7203887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | + |
Start bp | 1081235 |
End bp | 1081798 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186180 |
Protein GI | 219113193 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCT TTGTTGCGGT TTCCAATTCT GGCGACGGAA ACCGTGTCAT GACCAGCCCC GATGGCGATA TCTGGACAAG TCGCGAGAGT GCATCAAACA ACTGGTGGAG TAGTGTCGCC TTTGGAATGG GGACATTTGT TGCAGTTGCT AAAACTGGGT TTGGGAACAG AGTCATGACT AGCACTAACG GCATTGACTG GGAAAGTCAA ACAAGTGTAC CAAATCATGA ATGGAATTGC GTCACCTATG GTGGTGACCT GTTTGTCGCA GTTGCAACAA ACCGTATAAT GACAAGCCCT GATAGCGTAT CTTGGACACT TCGAACAAGC CCAAACTTCA AAGCCTGGTC TAGTGTCACG TACGGTGATG GAGTGTTTGT GGCTGTTGCT GAAGCCCTTG GTGACGAAGC GATGTACAGT CGTGACGGCA TTAATTGGAG GACGGGATCG ACAGCAAAAG GTTATGCTTG GTCTAGTGTG ACATTTGGCG ACGGAATGTT TGTCGCGGTT TCTTCCACCG AGGCAATGGA TAACGTCATG ACGGGGATGG AAAGTTCGGG TTGA
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Protein sequence | MNTFVAVSNS GDGNRVMTSP DGDIWTSRES ASNNWWSSVA FGMGTFVAVA KTGFGNRVMT STNGIDWESQ TSVPNHEWNC VTYGGDLFVA VATNRIMTSP DSVSWTLRTS PNFKAWSSVT YGDGVFVAVA EALGDEAMYS RDGINWRTGS TAKGYAWSSV TFGDGMFVAV SSTEAMDNVM TGMESSG
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