| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_25932 |
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| Symbol | ACD1 |
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| ID | 7203934 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | + |
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| Start bp | 1342002 |
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| End bp | 1343869 |
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| Gene Length | 1868 bp |
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| Protein Length | 436 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | short chain acyl-coenzyme A dehydrogenase |
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| Protein accession | XP_002186235 |
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| Protein GI | 219113303 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACTTGTGTC GGTGGCTCCA ACAAATTACT TCCATTGCCA GCAAGAACTA GCTGACATCA
ATAGACGTTG GCAGTCGTTC CGAAAAAAAC CTCCCTGTCC CTGAACACCA ACGTAATCTC
CACACTGATC ATCATGTCGT TGCTCACTCG CGCTGTTACA TTTGCTCGTC CAAGTCTTGC
AAACGCCGCG TTTCGTGGTT CCGTCGCCTC GAACAAGGCT GTCGGTTCGT CTCCCCTAGC
TGGTTTGTCC AGGAAATCCT ACATGACATA CTCGATGCTT CCAGAAGAGC ATCGTATGAT
CTACGAAATG TGCCGCAATT TTGCGAACGA AAAGCTGGCA CCGCATGCCG GAGAGTGGGA
TGAAAAACAC ATGTTTCCGA AAGACGCCGT AACTCAGTTG GTACGTCGTC CTGGAGATGG
AACCTTTCTC GGGGGCCTCG GCTGACGCAA GTCAGCGATA GATGTGTTTC CAACAGTCAA
TGGAGAAACA ACGGTTCTCC ACGTAGCTTT TGATGTTCTC ACCAGCTACT TTTCCTGCCG
ATTGTTTCTC AAACCACAGG CGGAACTGGG TCTCATGGGA ATTAACACTC CGGAAGAGTT
CCAGGGATCA GGACTGGACG CCATGTCCTA CGCCATTGCG ATGGAAGAAA TCTCTCGTGG
ATGTGCTTCG GTTGGAGTCA TTATGAGTGC ACACAATTCC CTCTACCTGT ACCCAGTTCA
GACGTTTGGT ACAGACGCGC AGAAAGAAGA ATGGGCGGCA CCCTACGCAG TGTGCGACGA
TGGCTCGGGC GGCAAACTAA ACATTGGCTG CTTCGGTCTT TCGGAACCAG GAAATGGTAG
TGACGCTGGT GCTGCCGCTA CGACGGCGAC ACTCGATGGG GATGAATGGG TTGTGAACGG
AACCAAAGCT TGGATTACGA ATGCGCACGA ATCTGGAGCT GCTATAGTTT TTGCAACGAC
CGATAAGTCA CTCAAGTAAG GAGACAAACC TTGTCGTGCG ATGCCGATAA AGGTGCTTGC
CGTGACCCTT TTATTGACTC ACCTATTGCA TTGTCACTGT TTTTTATTCT ATTCTTCTGC
CAGACACAAA GGAATCTCTG CTTTTATTGT TCCAATGGAC GCTCCCGGTT TCTCGTTGGG
GGCCAAGGAA GACAAACTCG GCATTCGGGC CTCGTCGACG TCAAACCTGA TTATGGACAA
TGTCCGTATT CCCAAAGATA ATTTGCTCGG AGAGCCCGGA ATGGGCTTCA AAATTGCCAT
GCAGACATTG GATGGTGGTC GCATTGGAGT GGCCGGACAG GCGTTGGGTA TCGCGTCGGC
ATCGATCGAT TGTGCCGTGA AGTATGCCTT GGAGCGTCAC GCCTTTGGCA AACCGATTTC
TGAGCTGCAG TCCATACAAA ACAAAATTAG CGCCATGACG GTGGCTCGGG ACTCGGCTCG
GCTGTTAACG TGGAGGGCTG CTCAGCTCAA AGACAACGGG GAACGCTTCA CGAGAGAAGC
CGCCATGGCC AAGCTTGCGG CATCGGAAGC GGCGACCATG TGCAGTCACC AAGCGATACA
GATTTTGGGC GGAGCGGGCT ACGTTCGAGA CTTTCCAGCG GAACGGCATT ATCGTGATGC
CCGAATCACC GAAATTTACG AAGGTACGAG TGAAATCCAA CATTTGGTGA TTGCCAATGA
TGTTTTGAAG GAGTACAAGA ATTCCAATTG AATATAAAAG GAATCGACAA GTAAGTGATA
CCGAAGCCAT TGCTCGTTTC TAAGCACGTA GCGATAGGAC AAAGGCCTAG ATATTGAGTT
TGGCTGAGCT AGTGGTCAAC CATTTAGCAG TAGCTATCGA TAACAGTATT CTCCTGCGGA
AACAACCC
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| Protein sequence | MSLLTRAVTF ARPSLANAAF RGSVASNKAV GSSPLAGLSR KSYMTYSMLP EEHRMIYEMC
RNFANEKLAP HAGEWDEKHM FPKDAVTQLA ELGLMGINTP EEFQGSGLDA MSYAIAMEEI
SRGCASVGVI MSAHNSLYLY PVQTFGTDAQ KEEWAAPYAV CDDGSGGKLN IGCFGLSEPG
NGSDAGAAAT TATLDGDEWV VNGTKAWITN AHESGAAIVF ATTDKSLKHK GISAFIVPMD
APGFSLGAKE DKLGIRASST SNLIMDNVRI PKDNLLGEPG MGFKIAMQTL DGGRIGVAGQ
ALGIASASID CAVKYALERH AFGKPISELQ SIQNKISAMT VARDSARLLT WRAAQLKDNG
ERFTREAAMA KLAASEAATM CSHQAIQILG GAGYVRDFPA ERHYRDARIT EIYEGTSEIQ
HLVIANDVLK EYKNSN
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