| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_18735 |
|---|
| Symbol | |
|---|
| ID | 7203903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 1148774 |
|---|
| End bp | 1150129 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186192 |
|---|
| Protein GI | 219113217 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.609957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGGCCGGGAC TACTACTAGT AGCGGCAAGA TGTTCAACTT TGGTATGTTC GCGCTCGAAC
AATTTAAAGG CCGGCTTCAT GAATGGCCAC AGTATTGCTC CCATATTGTA CAGATACCAC
ACTTGAAAGA TGGCTACGCT GCGTTAGTTT CTGAGATTGA ACGAGAAATG AGCAAGAATC
AGGGCGCTGC TTCCGTGGCA GGCCAACAGC CTCCTGTACC AAAAGTTCTT GAATCAGGAC
TCGCTGGCGA CACTTTACTA CCTCATCCAC CGGGCGAGGC AATAACGTCC CATCGATCCC
AAAGTGCTCC CGTACCAAGT GCGCTTGAGC TATCGTCGGA GGTGCTGAAC TTATCCTCGC
CGCCGCGGGT TGCCGAGTTT GGGCCTAAGC TTGGGCGTGC CGTGACGGAT AGTCCTGATT
CCGAAAACGA CTTTGATGCT CCGACGGATA CGGTTTTAGA CCGCGTCCAG TTCTTGGTGA
ATAATCTTGC ACAGTCAAAC GTAGAGCAGA AGGCTCAGGA CCTCAAGGAG ATGTTGGACC
CAAAGTACTT TGGTTGGCTT GGTCATTTTT TGGTTGTAAA GCGCATTAGC ACACAAGCAA
ATTTTCATTC GCTCTATTTG TCATTCCTCG ACAATCTAGG GGACTATGGA AAAGGTTTGA
TGGAAGCGAT CATCAATAGC GTTTACCGCA ACATCGGAAA GCTTCTTCGA TCGTCCAAAA
TTACGACGTC GTCATCGGAG CGAGGATATC TCAAGAATCT AGGAATTTGG CTTGGTCAGA
TTACTCTGGC TCGAAATCGG CCAATTCTGC AGATTATGTT GGACGCAAAG GAATTGCTAC
TCCAGGGATA CGAAACGGGC AAGCTGATCG CGGTTGCCCC GTTTTTGGCA AAGACCCTTG
AGGGTGCGAA AAATTCCAGA ATTTTTCGTC CACCAAATCC TTGGCTCATG GGCATTCTTG
GTGTATTTCG GTCGGTTTAC ATGGTCGACG GTCTCAAGAT GAATATTAAA TTCGAAGTTG
AAGTTCTCTG CAAAAATCTT GGCATAAAGC TGGAAGAGAT TCCGCTCCGC AACGGCGTCC
TGGCGAAGCG CATCGCACCG GTGAAAGAAC GTAATCCTGA TTTTAACATC AAGAGCGCAT
CATCGGGGTC AAAGTCGTCC GCAACGGGAG TCGTGCCTTC CCGCTCTCTT GTCGGTAGCT
CTGAGGCTCA GTCTCTCAAT TTGCCGATTC CGTCGACAGT ACCAAGTAGC GAGGATAAGT
CGGGGCAAGA CCCACAGGAC ACGGTAATAC CTAATCTTGC CTCTTACGTC ACAGTCAACG
CAAGCTTGCC GCAGCTTCTC CAAACCCAAG GGAGCC
|
|---|
| Protein sequence | MFNFGMFALE QFKGRLHEWP QYCSHIVQIP HLKDGYAALV SEIEREMSKN QGAASVAGQQ
PPVPKVLESG LAGDTLLPHP PGEAITSHRS QSAPVPSALE LSSEVLNLSS PPRVAEFGPK
LGRAVTDSPD SENDFDAPTD TVLDRVQFLV NNLAQSNVEQ KAQDLKEMLD PKYFGWLGHF
LVVKRISTQA NFHSLYLSFL DNLGDYGKGL MEAIINSVYR NIGKLLRSSK ITTSSSERGY
LKNLGIWLGQ ITLARNRPIL QIMLDAKELL LQGYETGKLI AVAPFLAKTL EGAKNSRIFR
PPNPWLMGIL GVFRSVYMVD GLKMNIKFEV EVLCKNLGIK LEEIPLRNGV LAKRIAPVKE
RNPDFNIKSA SSGSKSSATG VVPSRSLVGS SEAQSLNLPI PSTVPSSEDK SGQDPQDTVI
PNLASYVTVN ASLPQLLQTQ GS
|
|---|
| |