| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_18620 |
|---|
| Symbol | |
|---|
| ID | 7203985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 707278 |
|---|
| End bp | 708245 |
|---|
| Gene Length | 968 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186114 |
|---|
| Protein GI | 219113061 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAGCTTTGTT CCGCAAAAGG TAAGAAGAGC CGACACGACA TCACCAGTTC GTAATTGTTC
GACTACTCAG ACCAAGGACT TCCGAAAAAA GGAGGAGGAC CTTCACAACA AAGCGCTCGG
AAGAAGGATC GAGTTTTTCA GTCTTGGAAA GTTTGGGACG TGTCGACCGT TTTGTTTTCT
GTTTCTATTC TTCTCACGCT CGCTCGTTTT GTTTGGTTCA AGGTATCGTC GTTTGCAAAA
CCTTTTTCCT TTCCACAATG AAACGGGTTT TTGGAAAAAA GAAGGCCGAG GCTCCGGCGC
CGTCGCTCGA CGAAACATCC TCGGGGCTCA ATAGCCGGAT TGAATCGATG GACCAGAAGA
TTGAAGGCCT CGAAAGTGAG CTACGTGGTT TCAAGGACAA GATTAAAAAG ACGAAAAGCC
CGGCCGCCAA GAAACAGCTG CAAAAACGTG CCTTGGAGAT TCTCAAACGT AAACGCATGT
ACGAACAGCA ACGCGATACC GTCTCGGGTC AACAATTCAA TATCGATCAA ACGTCGTTTG
GATTGGAATC TGCAAAAGCC AGCGTCAGTA CTGTCGCGGC TATGAAAGCT GCCAATAAGG
AGCTCAAAAA GACTATACGG AAAGATTTGG ATATTGATGA TGTCGATGAT CTTGCGGACG
ATATGGCGGA GCTCATGGAG GATTTCAACG AAATTAATGA AGCATTGGGA CGCAACTTTG
CGACTCCCGA CGACTTGGAC GAGGCCGACC TAGACGCCGA GCTCGAAATG CTGGGAGACG
AACTTGAAGA GGAGTTTGAG GCAGAGACGG CGGATGCTGC ACCTAGTTAT CTCTTGCCAT
CGACTCCGCT GGACACTCCT GGCGAGAAAA CCGGAAGTTC CGCTGACGAC TATGGTCTTC
CTACAGCACC AATTGGTAAT CAGTAGCTGT GTTTTGACTA TAGAATGCTG GAAAAAGCAG
TTTTTTTT
|
|---|
| Protein sequence | MKRVFGKKKA EAPAPSLDET SSGLNSRIES MDQKIEGLES ELRGFKDKIK KTKSPAAKKQ
LQKRALEILK RKRMYEQQRD TVSGQQFNID QTSFGLESAK ASVSTVAAMK AANKELKKTI
RKDLDIDDVD DLADDMAELM EDFNEINEAL GRNFATPDDL DEADLDAELE MLGDELEEEF
EAETADAAPS YLLPSTPLDT PGEKTGSSAD DYGLPTAPIG NQ
|
|---|
| |