Gene PHATR_18481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_18481 
Symbol 
ID7204280 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand+ 
Start bp229447 
End bp230200 
Gene Length754 bp 
Protein Length213 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186021 
Protein GI219112875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.228231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAATTTGTT TCGGTAAACT CTACCAGCAG CTCGGTGTCC ACCATGTTAT CCAATACTTT 
CCGCCTTCGC CCTTCCATAG TATTGTTTGG CGACTCCATT ACGGAACAAG CCTTTGGCGT 
GGATGGCAAC GTGGGGTGGG CCTCGTTGTT GGCCGCCGCG TACAGTCGAC GCGCCGACGT 
TCTCAATCGG GGCTTTTCCG GCTACAACAC GTCCCACGCC GTGGAGCTCT TACCGCGTGT 
CTTTACGGGA CCGCTTGATT CGCCACCGCT CTTTGCGACC GTCTTTTTCG GAGCCAACGA 
CGCGGCGTTG CCCGGAGAAC CGCAACACGT ACCTCCGGAC GACTACGAAC GCAACATCGA 
AACCATTGTA GCGCATTTGC GACGCAGTCT CTTACCTGTT CGTGCGGGTG AACACCGTAC 
ACCGAAGAAT CCTATTGGAT CAGAATCTAC AGCAACAGCA AACGTTTCTA GCCCGGCGGT 
ACCAATTGTC ATTTTAGTGA CTCCTCCACC GGTTTTGGAA TCGGCCTGGG CCGACTTTTT 
GCAGACCCGG GCGGATACCA CAGGGGAGAC CCGGGGGTCC GACCGGGACA ACACAACCAC 
TCGCCTATAT GGCGAACGCT TGCAACGAGT TGGAATCAAG TTATCATGCC CTGTGCTGGA 
TTGTTGGAAC TTGTTAGGTG GTGATTCCGA GGACCGTGGT CGATATCTGT CGGACGGGTT 
GCACCTGAAT CCGGCCGGAA ATCGAGCCGT CTTT
 
Protein sequence
MLSNTFRLRP SIVLFGDSIT EQAFGVDGNV GWASLLAAAY SRRADVLNRG FSGYNTSHAV 
ELLPRVFTGP LDSPPLFATV FFGANDAALP GEPQHVPPDD YERNIETIVA HLRRTNVSSP 
AVPIVILVTP PPVLESAWAD FLQTRADTTG ETRGSDRDNT TTRLYGERLQ RVGIKLSCPV 
LDCWNLLGGD SEDRGRYLSD GLHLNPAGNR AVF