| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_10546 |
|---|
| Symbol | |
|---|
| ID | 7204095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 1209871 |
|---|
| End bp | 1210815 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186202 |
|---|
| Protein GI | 219113237 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGAG ATCGCAATCA TGTCGTGGTG GTCGGATCCG CCAACCAAGA TTTGACATCC
TACACTCCCA CTGTGCCAGT CATGGGCGAG ACCGTTATGG GTCAAGAATT CGAAACCTCG
TGTGGAGGAA AAGGTTCCAA CCAAGCCGTC GCGGCGGGCA GTCTCGGAAT TAGTCCTGTT
ACCATGATCT GTCGCGTAGG GGACGATGTA TTTGGCGAAG CGCTCCTCGA CAAATTGGCT
AGCGTAAACG TTGCCTGGGA CGAAACTCGT ACCATTTTGA GAGGCAAAAA TAGTCCTGCC
TCGGGAACGG CTACTATTGT GGTCGATACC AACAGTGGGG ACAATATGAT TATCGTGACA
CCAGGTGCTA ACTATGCGCT TTCTCCGAAC GACGTGGAAG AGTCGCTGCG AGCCCTTCCC
GAACCGCCTG CCATTGTTGT AGTGCAGTTG GAGATCAAGC CTGCTGCCGC ATTACAGGCG
CTCCGCACTG CAAAAGATTT GGGCGCCATT ACGGTTTTAA ACCCGGCACC CGCCCCGGAA
GGCTACACGC TGGATGATTT TTTCCCGTAT GTAGATATTC TGATTCCCAA CGAGACCGAA
TTGAGAAAAT GTCTCGGGAA AGATGAATTG TCCGACGAAG ACGAAGAAGC GCTAGCCAAA
GAATTGCTCG ACAAAGGGAT GGGTATGGGA GTCATTGTAA CTCTAGGCGC TCGGGGAGCC
ATGGTCGTGG CCAAGAAAGA CACAGACTCC AATTATGTGG AGGTTACTTT AGTGGACGCT
CCAAGAGATC TGCCAGCGCG CAACGAACCT ATTAAAGACA CAATTGGAGC AGGCGATGCC
TTTTGCGGTG CACTGTCGAC TTATCTTTCG GCCGGTTTAT CCCTGACGGA GGCTGCTGGC
AAGGCATGCG GTGTGGCTAG CATGTCGGTG CGGCGTCGTG GCGCC
|
|---|
| Protein sequence | MPGDRNHVVV VGSANQDLTS YTPTVPVMGE TVMGQEFETS CGGKGSNQAV AAGSLGISPV
TMICRVGDDV FGEALLDKLA SVNVAWDETR TILRGKNSPA SGTATIVVDT NSGDNMIIVT
PGANYALSPN DVEESLRALP EPPAIVVVQL EIKPAAALQA LRTAKDLGAI TVLNPAPAPE
GYTLDDFFPY VDILIPNETE LRKCLGKDEL SDEDEEALAK ELLDKGMGMG VIVTLGARGA
MVTLVDAPRD LPARNEPIKD TIGAGDAFCG ALSTYLSAGL SLTEAAGKAC GVASMSVRRR
GA
|
|---|
| |