| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_10438 |
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| Symbol | PDS-like1 |
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| ID | 7204401 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 645554 |
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| End bp | 647227 |
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| Gene Length | 1674 bp |
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| Protein Length | 545 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | PDS-like 1, phytoene desaturase-like protein, phytoene dehydrogenase-like protein |
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| Protein accession | XP_002186389 |
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| Protein GI | 219113611 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.460239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGAAT ATAGCCTATC GGAGCGAAAG AAGTTTGTCA TCGTGGGAGC AGGATGGGGA
GGATGGGGAG CGGCGAAAGC TCTTTGCGAA GGCGGGGTCG ATGCAGAGAT CATAATGATC
GACGCGCTAC CGGATCCGAC GGGTAGAACA CCGTACCTTT CTTCAACCGG GAAACCTGTA
GAAGCCGGCA CTCGAGGATT CTGGAAGGAC TATCCGAATA TAAATGCACT TTGCAAGGAA
TTGGGGCTGA ATGAAAACGA AATATTCACT GATTACACTA ATTCTTCCTT CTACTCTCCT
GACGGCTTGG AGGCGACCGC TCCTGTTTTC TCCAACGCCA AGTTTCCCGA GTTCGACCAG
ATTCCCTTTC TGTCGAGCCT TTCCGGTCAG AAAATTCCTC CCCTACCCTC TCCTTTAGGG
CAGGTTCTTG CCACATTTCC CTTGTTTGAA CGTATCCCGT TAATAGACCG TGCTTCAATG
GTCGGCCTTC TGGTTGCTAC GATTGACTGT CTAGGAGGCG ACGAAAGCGT CCAAGCACAG
TACGATCGTA TGACTGCCCA TGAGTTGTTC ATCAAGTTTC AACTCACTCC GCGATTGGTC
GAAGACTTTA TCAAACCCAC ACTTTTGGTC GGTCTTTTTA AACCACCAGA AGAGCTCAGT
GCTTTGGTGG TGATGGAGCT CTTGTACTAC TATGCACTAG CGCATGTGGA CAGCTTTGAT
GTTCGATGGA TCAAGAATGG AACAGTTAGT GACTCGTTGG TTGCGCCTTT GGCTACCAAA
TTGGAAACCG AGTTTAACTT GACTGTCCTT GGGGGCTGTC GCGTCGGAAA GATTTCGGTA
GAAGAGTCTA TAGACAAGAA ACATCGGGTC TCAAGTCTCG AGTATAGCGT GAACGGAAAG
ACTGAAAAAA TTGAGAATAT TGACGGTGCT ATCTTGGCTC TTTCCTGTAA TGGAATGAAC
TCAGTCGTCA GTAGCAGTCC TGATCTTGCC CGTTTCCCAG TCTTTTCTCA GGCTGCGTCG
TGCAAGGGAA TTGATGTCAT TTCTTGCCGT CTTTGGCTCG ACAAGACCGT CCCAACACGG
ACACCCGCCA ATGTACTTTC CCGATTCGAG GAACTTCGCG GTGCTGGTGG AACTTTTTTT
ATGCTCGACC AACTCCAGTC CGATAATGTC AGGGAGCTCT GGGGTGGTGA CGAGCCGCAA
GGATCTGTTG TGGCTTGCGA TTTTTACAAT GCCGGTGCGA TCCTCAGCAT GAGTAACGAG
GACATTATCA AGATACTTAT CCAAGACTTG TTGCCAGCGG CTGTGACCGA GTTTGGGGAT
GCAAAGGTTG TCGACTCTTG GATAGGCCGC TACCCCGGAA CAGTATCTTG GTTTGCCCCC
GGAACGTTCG ATAAACGACC TCCGTTGCAA GGCGCTGGTA AAGCACTTCA AAATCTCAAG
TGCGCTGGGG ACTGGGTGCG TATGGGCGAC CGCGAGCACG GCGCGAAGGG GCTTTGTCAG
GAGAGGGCAT ATGTGTCGGG TTTAGAAGCC GCAAACGCCT TATTGCAGGA CGTCGCAACA
GTGAGCAAAG CCCACAACGT GATTCCAGTC CGTGAGGATG AAGCCCAGTT CAAAGCGGGT
GTAGCCCTCA ACAATCAAGT CATGACGATC TTCCCACGGT TTTGGGTGCG CTAG
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| Protein sequence | MKEYSLSERK KFVIVGAGWG GWGAAKALCE GGVDAEIIMI DALPDPTGRT PYLSSTGKPV
EAGTRGFWKD YPNINALCKE LGLNENEIFT DYTNSSFYSP DGLEATAPVF SNANLSGQKI
PPLPSPLGQV LATFPLFERI PLIDRASMVG LLVATIDCLG GDESVQAQYD RMTAHELFIK
FQLTPRLVED FIKPTLLVGL FKPPEELSAL VVMELLYYYA LAHVDSFDVR WIKNGTVSDS
LVAPLATKLE TEFNLTVLGG CRVGKISVEE SIDKKHRVSS LEYSVNGKTE KIENIDGAIL
ALSCNGMNSV VSSSPDLARF PVFSQAASCK GIDVISCRLW LDKTVPTRTP ANVLSRFEEL
RGAGGTFFML DQLQSDNVRE LWGGDEPQGS VVACDFYNAG AILSMSNEDI IKILIQDLLP
AAVTEFGDAK VVDSWIGRYP GTVSWFAPGT FDKRPPLQGA GKALQNLKCA GDWVRMGDRE
HGAKGLCQER AYVSGLEAAN ALLQDVATVS KAHNVIPVRE DEAQFKAGVA LNNQVMTIFP
RFWVR
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