Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_10418 |
Symbol | |
ID | 7204231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | + |
Start bp | 792698 |
End bp | 793825 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186131 |
Protein GI | 219113095 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00425999 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGTC AGTACGCCGC AGAATGGGAA GCAAAGGGCG GAATTTTCTC TTTGGCACAG GGCGTCGTTT GGTGGCGTGA ACCGACTTCA TCAACACAGG CCCTCATTTC CGCTTTACAG GAAAAGGATA GCATGCTGCA CATGTACGGA CCCGACGAAG GATTGATAGA TCTTCGAGAT GCCTTACAAG AAAAGATCAG GGATGAAAAT GGTCTGGAAC ACCACCAAGT TATGGTCACA GTGGGGGCAA ACCAAGCGTA CGTGAACTGT GTACTGACGC TGGTCGAAGA ACAGGACAAA TGCGTCGTCT TCAAACCGTA CTACTTCAAT CATGTTATGG CTTTGCAAAT GACACTGCCG AAAGATTGCC TGATGGTGGG ATCGAGTAGT GATGACGGAA TTCCGGATCT GAAATGGCTG GAGTCAAACC TACGACAGGA TTCTTCTATT AAAATGGTAA CGATCGTCAA CCCCGGCAAT CCAACCGGCA CTCTGCTGTC TCGGGATTTT CTTCAGAAAG CTGTTGATCT ATGCCGATAT TACGGTTGTT GGCTTATTTT GGATTGCACG TATGAGTACT TTGTACCCAG AGGATCGCGA TTTGACGGCT GTTTTAAGGA TCCGCATGTT TTACACATAT TCTCCTTTAG TAAAGCATAC GCCCTGGCAG GCTATCGATG CGGATATGTT ACTGTTTCAC GGGATGCACA TGGAGTTTAT GAAGAAATGA CCAAGGTACA AGATACAATA CCAATCGCTC CTTCGCGAAT TTCACAAATA GCTGCACTTG GGGCTATGAA AGCGGGAAGC TCGTGGGTAG AGGAAAAGGT CGCCACATTG GATACCGGTA GAAGCGCTAT TCTGAAAGCA TTAGAGCCGC TGGACCAGAT AATGGGTGGA TCGGGCGCCA TGTATATTAT GGGGAAGCTG AAAGATGGGA GCGACGATCA AGAAGTGGCG AGGCGATTGG TGCAAGAGTT TGGGGTTGCA GTGATTCCGG GAAGCTTCTG TGGCTCTCCG GGATGGATCC GAGTGTGTTA TGCGAATTTG CCCCCCGAAA AATGCTTGGA AGCCGCCGTA CGACTAAAAA AAGGCATCCT GGCAGTTGAA GAGGACGCAT CGTTGTGA
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Protein sequence | MIGQYAAEWE AKGGIFSLAQ GVVWWREPTS STQALISALQ EKDSMLHMYG PDEGLIDLRD ALQEKIRDEN GLEHHQVMVT VGANQAYVNC VLTLVEEQDK CVVFKPYYFN HVMALQMTLP KDCLMVGSSS DDGIPDLKWL ESNLRQDSSI KMVTIVNPGN PTGTLLSRDF LQKAVDLCRY YGCWLILDCT YEYFVPRGSR FDGCFKDPHV LHIFSFSKAY ALAGYRCGYV TVSRDAHGVY EEMTKVQDTI PIAPSRISQI AALGAMKAGS SWVEEKVATL DTGRSAILKA LEPLDQIMGG SGAMYIMGKL KDGSDDQEVA RRLVQEFGVA VIPGSFCGSP GWIRVCYANL PPEKCLEAAV RLKKGILAVE EDASL
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