Gene PHATR_10418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10418 
Symbol 
ID7204231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp792698 
End bp793825 
Gene Length1128 bp 
Protein Length375 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186131 
Protein GI219113095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00425999 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGTC AGTACGCCGC AGAATGGGAA GCAAAGGGCG GAATTTTCTC TTTGGCACAG 
GGCGTCGTTT GGTGGCGTGA ACCGACTTCA TCAACACAGG CCCTCATTTC CGCTTTACAG
GAAAAGGATA GCATGCTGCA CATGTACGGA CCCGACGAAG GATTGATAGA TCTTCGAGAT
GCCTTACAAG AAAAGATCAG GGATGAAAAT GGTCTGGAAC ACCACCAAGT TATGGTCACA
GTGGGGGCAA ACCAAGCGTA CGTGAACTGT GTACTGACGC TGGTCGAAGA ACAGGACAAA
TGCGTCGTCT TCAAACCGTA CTACTTCAAT CATGTTATGG CTTTGCAAAT GACACTGCCG
AAAGATTGCC TGATGGTGGG ATCGAGTAGT GATGACGGAA TTCCGGATCT GAAATGGCTG
GAGTCAAACC TACGACAGGA TTCTTCTATT AAAATGGTAA CGATCGTCAA CCCCGGCAAT
CCAACCGGCA CTCTGCTGTC TCGGGATTTT CTTCAGAAAG CTGTTGATCT ATGCCGATAT
TACGGTTGTT GGCTTATTTT GGATTGCACG TATGAGTACT TTGTACCCAG AGGATCGCGA
TTTGACGGCT GTTTTAAGGA TCCGCATGTT TTACACATAT TCTCCTTTAG TAAAGCATAC
GCCCTGGCAG GCTATCGATG CGGATATGTT ACTGTTTCAC GGGATGCACA TGGAGTTTAT
GAAGAAATGA CCAAGGTACA AGATACAATA CCAATCGCTC CTTCGCGAAT TTCACAAATA
GCTGCACTTG GGGCTATGAA AGCGGGAAGC TCGTGGGTAG AGGAAAAGGT CGCCACATTG
GATACCGGTA GAAGCGCTAT TCTGAAAGCA TTAGAGCCGC TGGACCAGAT AATGGGTGGA
TCGGGCGCCA TGTATATTAT GGGGAAGCTG AAAGATGGGA GCGACGATCA AGAAGTGGCG
AGGCGATTGG TGCAAGAGTT TGGGGTTGCA GTGATTCCGG GAAGCTTCTG TGGCTCTCCG
GGATGGATCC GAGTGTGTTA TGCGAATTTG CCCCCCGAAA AATGCTTGGA AGCCGCCGTA
CGACTAAAAA AAGGCATCCT GGCAGTTGAA GAGGACGCAT CGTTGTGA
 
Protein sequence
MIGQYAAEWE AKGGIFSLAQ GVVWWREPTS STQALISALQ EKDSMLHMYG PDEGLIDLRD 
ALQEKIRDEN GLEHHQVMVT VGANQAYVNC VLTLVEEQDK CVVFKPYYFN HVMALQMTLP
KDCLMVGSSS DDGIPDLKWL ESNLRQDSSI KMVTIVNPGN PTGTLLSRDF LQKAVDLCRY
YGCWLILDCT YEYFVPRGSR FDGCFKDPHV LHIFSFSKAY ALAGYRCGYV TVSRDAHGVY
EEMTKVQDTI PIAPSRISQI AALGAMKAGS SWVEEKVATL DTGRSAILKA LEPLDQIMGG
SGAMYIMGKL KDGSDDQEVA RRLVQEFGVA VIPGSFCGSP GWIRVCYANL PPEKCLEAAV
RLKKGILAVE EDASL