| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_10409 |
|---|
| Symbol | |
|---|
| ID | 7204345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 341362 |
|---|
| End bp | 342619 |
|---|
| Gene Length | 1258 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186045 |
|---|
| Protein GI | 219112923 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGTATTCTTA ACTTCAGCTT GAACAAATTA CCCTACACGG CTGTCATGTT TTTTATTGGA
ACAGTGATGG GTATTGGAGC GGAACTTTTG GATGATTCTG AGGACCAGCT CAACGAAAGT
ATTCGTTTGT GGATTCCCAT TGATAGCGAG GTGCTGCTGC TGGTTTTTCT ACCTGGCCTC
ATTTTCAAGG ATTCTCTGGG CCAGAATGTG CACCTTTTTC AAAAATCGAT TGTCCAATTG
CTTATATTTG CCTTCCCATT GGTTTTGGCC GGAACTGTTT TGACGGCTCT CATTGCCTAC
TACATTTTCC CTTACGGCTG GTCTTTCAAT CTTGCCATGA CCTTTGGGAG CATCCTTTCC
GCCACCGATC CCGTGGCGGT GGCGGCCCTT TTGGAAGAAG TAGGAGCACC GCCCCGACTT
AAAGTCCACA TTGCTGGGGA AAGTTTGCTG AACGATGGAG CCGCGATTGT CTTTTTCTCC
ATCTTTGTGG CGCGATATCT TTTCGAGCTC GGGATCGAAG GTGTCGGAGA AGATGTAGAT
TGGGGGAGAG GTGTCGCTAT GTTTTGCCAA AAAGCCATTG GCGGTGTTTG CATTGGTATA
TTCTTTGGTC TGGGGCTTCT CACCATTCTC TTTCTTTTGA AGCGTCGCTT CAATCGCGAA
GAAAATGTTG TCGAAGTGAC GGCAACTATT GCTATTGCCT ACATTGGCTA CTATGTTGCG
GACGCTGTAT GGGCCACGAG TGGTGTGATT GCCACTGTCA CGCTGGGTCT GATGATCAAG
TTTTTAGGTC GTGCCATGTT CAACGATGCC AAATTGCTCG AGGATTTCTG GACGTTGGTG
GAACATTTAC TGAACACAAT TTTGTTTACA CTTGGCGGAA CTGTATGGGG TAAGCTTCAA
TGTTCGCTGC ACTTGAGGAT GTGTGTTCCT GATCCACTTT CTCATACAAT TAGTCCGTAC
AACGCATCCA CCAGGAGCTG TGATTGCCAA TGGTGGAAAG GAGAAATTGT TCACAGGCCG
TGACTGGGGC TATCTCGTTT TGCTCTACAT CTTCCTCACA GTTATTCGGG CTTTCCTTTT
CGCAAGTGTG TATCCACTAA CAAGCCGCAT CGGTTTGAAG GTATGTTATT CTGATCTCTC
ATTAGATGCG CAAACTTTTG TGCTCAGTCT ACTTTTGTCG TGATAGGGTT CACCACAAGA
AACCATATTT TCCATTTATG GTGGGCTTCG GGGGGCGGTC GGTTTAGCCC TCGCTCTC
|
|---|
| Protein sequence | CILNFSLNKL PYTAVMFFIG TVMGIGAELL DDSEDQLNES IRLWIPIDSE VLLLVFLPGL
IFKDSLGQNV HLFQKSIVQL LIFAFPLVLA GTVLTALIAY YIFPYGWSFN LAMTFGSILS
ATDPVAVAAL LEEVGAPPRL KVHIAGESLL NDGAAIVFFS IFVARYLFEL GIEGVGEDVD
WGRGVAMFCQ KAIGGVCIGI FFGLGLLTIL FLLKRRFNRE ENVVEVTATI AIAYIGYYVA
DAVWATSGVI ATVTLGLMIK FLGRAMFNDA KLLEDFWTLV EHLLNTILFT LGGTVWAVIA
NGGKEKLFTG RDWGYLVLLY IFLTVIRAFL FASVYPLTSR IGLKGSPQET IFSIYGGLRG
AVGLALAL
|
|---|
| |