Gene PHATR_10284 details

Gene Information

• Locus tag: PHATR_10284
• ID: 7204240
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 876952
• End bp: 882368
• Gene Length: 5417 bp
• Protein Length: 175 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002186146
• Protein GI: 219113125

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.61976
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCAAAATTG TACACGAAGA CGAACACATT ATTGTCGTGG ATAAACCCTC CGGCGTACTC 
ACCGTCCCCT CCGACAAGAA TGTTCCGTCC CTGGCACAAG CTGTCTTTGA TCACTGTCAA 
CCCACGGAAG TCACTCTTGA TCAAATGGTC GTACACCGCC TCGGTATGGA CACTTCCGGT 
CTCATTGTCT TGGCCAAAAC CATGGACACG GTACGTCAAA TGAACGCACT CTTCCGCACC 
CGCAAAATTA CCCGACAGTA CGAAGCACTC GTCGTCGGAC ACTTGCCCCA ACACGGTGGT 
TTGATATCCC TGCCGCTCAT GCGTGATTAC GAGCATCCTC CCTACATGCG TGTATCGACC 
GAAGCGCACC AGGCCGCTCT GGCCGATTTG GACCCCGCCG TCGTTGGCAA GAAATTACTC 
GAAGCGCCCA AAGCCGCCAT GACACACTTT GTCGTCGAAG CCCGCGAAAC CTTGACCCCC 
GACGGGAATG ATGATGACGA TGAGGACAAT GTACAAGGAC TGGACGTTTC GCGGTTGACC 
CTCACGTCCA TTTCGGGTCG CACCCACCAA TTGAACGTGC ATTTGGCCGC CGTCGGACAT 
CCCATTGTAC AGGATACCGT CTACGGATGG CAAGGGGAGG CCGCGGCCAA CGGTGGATTG 
GAGACGCCGC AAGCACCAGA CGGGACCGCC GCGTCGGAAG AACTGCAGCA AGCCGTCACG 
GCCGCGACCA AAAAACGCAA CATGTGCGTA CACGCCAAGT ACATCAGATT TCGACATCCC 
GCGACCAAAG AAACGGTGGA ATTCACCAGT CCGGCGCCGT TTTAAACCGA TGAATAACAG 
ACGATGACGG CGATTCCTTG GTTTGATTGA TTGTTGCTCA GGCGGGGCGA GCTTCTCCCC 
GATACAGCAA AGTGCGAATG TTGATTTCTC CGTGGATAAA CCGTTTGATC CGGAGAAAAA 
CCTTTGTGCC CCGGGGAAGT ACCGTCAATC ATCGCCGTTG TCTGTGGCTA GCTAGAGTAT 
CAATATCGTT TCCTTACATT AGCTATGTAA AAACTCTCAT TCTCTTGTAG AGAATAACGG 
TACCCTCTTT CTGTATCGGT AGACAATCGA CAATCAGCCT TGCCTGATTT GTGGAGGCAT 
ATAGAGTCGA CTGTACACAC CTACACATAT ACCAGTTGAC GAGGTTGACG GAACACCAAT 
TTTATTGCAT TTGCTTCGAC ACGTTGGAAC ACGAGCGCGA GACAATCCTT TCTTGTCAAA 
TTGTCTTTAC ATTTGGTACC GAGGAAAAAG CGGTCTGTAC ACGTTAGTCG GACGGCATCG 
GCTACTAACA ACTTCCCTTA TCGATTTCCA ACCATACTAG CAAAAATGCG TATTAAACGC 
CCATAGTTTT AGCACAAGAT TACAAGAGAG TATGAATAAC GTTTCTCTTC CCAGAAGAGA 
TAGGTAAGAT AATATGGGAG CGTTCAGTTG CGCAAGAACT TTTTGTAACA CGACGGCAGC 
CACTCGCCCC GTAGCGACCA GCCGTAAAAT TGTAATTGTT CTTTGACTCG CAACGTGTAA 
ATTTTCACAG GGTAGATTAA CAAAGGTTGT TACAGCCTCG CAAGGAGGAT GCGAGGCGAG 
AAACAAACAG GAAGAAAATA CAGAACGGTT TGCTGGCTGA CTGATTGCTT GCTCAGCCAA 
CTAGTTCGCT TGCATGGCTC GGCACGCAAC TTCCACCAAC ATTGGAAGTG AAGGGGACCG 
GGCCGTCACT TCACGGTAAT CCTGCATGTC ATTGAGCGGC GGCGAGACGA GAGACGGGGC 
CGACATGCCA AGCTTAGGAG TTTGAAGTTC AAACGAAGTT GATGCTGCGA AGCTTGGAGA 
GTTGGGCTGT GGAGAGATTC GACGAGGATC AGTGTCGATA TTGTCCGGAA TCGGAAAGAG 
GCTACAACGG GCCAGGCTCG AGTCCACAGG ATGCGTTTCG GTAGAGTAAT GTCGAGGAGT 
AACGATGTTC GACCACTTGA CTTGGCTTCC GGTAGACTTC GTACGCGGAG GAGACACAAA 
ATCGGTCGGT GTGGTCATCT CAAGAGTCTT CATTGCCGGT GCAGCGCCCG GATCCATCGC 
GAAGACGTGT TCCACAGAAG CTCGAACAAT TTTGCGACAT CCTCGTTCCA TCATGGCGGC 
GAGAATAGCC GTATCTAAAT CGATGGTGAC GGATGTGAGC TCTCCAGGCG CATTTTGTGA 
GCTAACGAAA GTGCCCTGTA CACTTCCCGG AACTTCCAGT GCAATTTCCG AAAAACCAAC 
GGGGGAATCT AGCGAAATGA CACAGTCCAA TAGCAACTGG TACTTTGCTT GATATTCGAA 
CGATGTCTCG TCACTCAAAC GTCGTCTCTT ATTCAGTCCA TCTTCGTTCG CGCTGGTTTC 
CAAAACCGGA AACGCTGTCC TGGCTCCGAC TACCCGAATC TGTTCGCCCA CGATTCCCAA 
GACGTGCACC AGGCGGGCTT CGGGTGAATC CAAGAGAGCC TTGATCTCCG ATTGGGCAGC 
CGCTTTCGAG CGCAACTCCT GCTCTCGTCG TGCCAAAGCC ACAAAACACT GCTCCTTCCA 
AGCTTGCACC CGCCACTGGA TTGCCTTTTG AAAGCTCTGC AGTAGATTCC GCGCCACCGC 
ATCCGCGGAC AGGCGGAGGG CGTACCGATC CTCTACTTTG AGTCCACGGC ACAAAAGTTC 
CGCTGGAGGA CGAGTCGCAC GGTTCTTTGC CGCAAATGTT TCCTTTTCGT TGGAAACACG 
ACGAGTGGGA GTGGAAAAAG GCGTTGGCAC GGCGCTACGA AGCGAACCCG TACTCTCTAA 
CGAAAGCGAT GGACACGTGA AGCAGAACGG ACGTGAGTCC ACAACGGGAC AGCGTTCGAA 
GGATGCCTCG CTTTCGTCGG ACGAAGAACT GACAAGTTCC GCCTTTTCCG CCGTCGTCAG 
CTTTGCGCGA GACGACATCA AGCTCATCAG TAGTTCTGCA TCTTGGCGGG TGTCAACATC 
ATCGGCAATG CCGGGCTCCG AAGTGCAGCT GTACGACCCT ATTCGATAGC AAAAGTCTAT 
TAGAACAGCC TGTTCGTGAG CAGGCGTCCT GTCCCTACAG TCTCTAAGCT GACGCTGGTG 
TGCCATCTCT AAGCATTCTT TTTCTGCCAT GATTGACTGT GATACCAATT TTTGGTTCGC 
CGCAACGAAA ATGCGTAAGA CTGCCAGAGG AATGCAGGCC GGAACAATGC TGTTTCAGCA 
GCGTTCGTGG CACGAAAGGT ATGTTTACGC GAAAGTGTTC TCTGGTTGGA CACCCTAGTG 
CCAGCAGCGT ACCCAGCCCC CCTTGCTCGC ACCTCAACCT CAACTTGTGT CACCGTAGAA 
GTACGTACAC GTTCTACGTT GTTCGGAGAT CTCGGCGACG CCGATTCCGA TGCCCGTTAA 
TAGGTTCTGA CGCCACAGAA CGCCAAATGT CGCGATGCAT TAGGGCCTAT TTCGTCCAAA 
CAATGGAAAG TCAATGACCT TTGGTCCTGG TCATATTCGT CCACCGGCCG CTCTCGTTGG 
TATACTTTCG TTCAAAGAGA CTCGCTTGCT TGCTTCTTTG TCCATTCCCA TAAGAACGCT 
AATAAATTCG AGAACGTGTG TATCCCGCAG AACGGATTTT ATTTAGATTC TCAGCTCCGC 
AATTTTTCCA AATAACATTT TGATGGCGCC CGCGCGAGGG TATGAGTGAT ATGGAACGCA 
AGTAGTCGTA GAGGCCAACG GACCCGAGTC CCCTTGACGT TTTATTCTTT TGCACCAAAC 
CATACACCGG TTCGGACTCA ACGCTCGGAA TCCAGTGATC AGATAGAGTT GGCTCTTATT 
GGTCGCGCAT CTCTCCGCCG ACAGTATCGA CCAATCGAAA GCCGATATAC TTCGGACCTC 
TCCGATGTTC GGTCGAACCT TTTCTCTCTC GGATCCAAAC GTCACCCACG ATCGGCCGTG 
AATTTCAAAA GTTTCGAATT TTCGAAAGGG ATTGAAAATC TGAAGTACAG AAGGAAGATT 
CCAAACTCTG TTGGAGTTCA CGTACGTGTT CAACCGGATC GGTGCCTCCA CAATCGTGGA 
GAGACCCGCG TTGTTTCTTG ATGGCCACAG GAGGCCAACT GACGCAGTTC ACTCAGGCCC 
ATATCCCATT GCGTCCCACA GAACATCCCC CCTCCATCAA CGAACAACAG CTGTGTGAAC 
GGCGAGAACC ATCCACCGCA GCGAACCCGT AAGCACGCAC CAAGTTCCCC ACACCTCGCA 
CCCGCACACT AGCGGCGTAC GGAAGACCGA ACGAGACGCC ACACACACAG CGAGAGCGAG 
ACATCAATCA CCCCGCTGGA GAAACCGAAT AACGAATAAA TCTATCTACT CTTTCACGTC 
GACCGAGAAG CCACACAGAG CAACTCGTTT CGCTATTCTT TCTCTATATC CAGTAGCTAG 
TATCACTGCT TATAACAGAA AAGGAGTCGA AGAAGATGCG TTTGAGTCTA ACGGTAGCGG 
TGTTGGCTTC GCTGTGTGCG GCTGGAGCGG CCTTTAACCC AGCCCTTGTG TCACGCGGCA 
CACTTGTCAG CTCCAGTAGT TTGTTGAGTA CGGTGGAAAG CCCTCCCGAG GTTGCCTCGA 
CCCCGTCAGC TTCATCCAGT GCTTTGAGTG GTGCCGAAAT CAAATCACGT ACGGAAGCCA 
CCATCGGAAA GCTTCGTGAA AAAGATAGCA AAAGTCCCCA GCTGAGCAAA GCTGTGAGTT 
ATGGGTTTTT TGCGTTTTTG GAAGTCCTCC GATGTACCGT TCCCTACGGA TTTCCTCACG 
GCATCCACTT TTCTCCTTTT GACAATACAG GACATTAAAG TAGTCTTCGA AGACGATCAC 
ATTATCGTCG TGAACAAGCC TTCCGGTGTT CTGTGCGTGC CCGGCAAGGA CAACTTCCCC 
AATCTCGCTC AGGCAGTCTG CGACGGCTTT GGCTGCGAAA TGGGCCGTGC CGACAAGATG 
GTCGTCCACC GACTCGGTAT GGACACTTCA GGTCTCGTTG TTTTCGCCAA AACGATGGAC 
GCAGTCCGCG GTATGAACGC GATCTTTCGT GCCCGCAAGA TTGAACGAAA GTACGAGGCG 
CTCGTCGCTG GACACGTTGA AAAGACGAGG GGATCATCAA TCTGCCTCTC ATGCGAGACT 
ACGAATTCCC TCCCTTTATG CGAATTTCTA CTGACGAACA CCAAGCAGCT TTGGTCGACT 
TGAACGCGGA GGAAGTCGGC AAGAAGCTTC TGGAAATGCC GAAGGAAAGT CTCACAAAGT 
ATGAGGTCGT CAACCGAGAG GACATGGACG GGACCCCGGT TTCTCGCGTT GCTCTTACCA 
GTATTTCGGG CAGAACCCAT CAACTAAACG TCCACTTGGC TGCGTTTGGA CACCCCATCG 
TAGGTGACTC GGTGTAC 

 

Protein sequence

LKIVHEDEHI IVVDKPSGVL TVPSDKNVPS LAQAVFDHCQ PTEVTLDQMV VHRLGMDTSG 
LIVLAKTMDT VRQMNALFRT RKITRQYEAL VVGHLPQHGG LISLPLMRDY EHPPYMRKLL 
EMPKESLTKY EVVNREDMDG TPVSRVALTS ISGRTHQLNV HLAAFGHPIV GDSVY